Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01147 ATGGCGCCGCATCTCTGGTCCTGCTTCACCAGAAAGGGCTCCAACCGTGGCGATGGCATCGCAGAGCGCCGAGTTAGCACGGCGGACATCGCTTCGGAATCGAGTCGCGGCGGCGGGGGCCAGGGGGCTGTGGTGGTGGAGATGTTCTCGTCGCAGGGGTGTGCGACGTCGCCGGAGGCGGAGCTGCTGCTGTCGAGGCTGGGGAGGGGGGACTTCGAGCTGGAGGTGCCGGTGGTGGTGCTGATCTTCCACGTGGACTATTGGGACTACGTGGGATGGAAGGACCCCTTTGGGTTGAGCCAGTGGACCGTTCGGCAGAAGGCCTATGTTGAGGCCCTTGGGCTTGACACCATCTTCACGCCCCAGGTTGTGGTCCAGGGCAAGGCCCACTGTGTCGGAAATGACGAGAATGCCCTTATTGAAACCATCACTAATGCTCCTAGATTTCCTGCTCCTACCCTCCAGGCAACTTTTACCAAGCCTGCACCAGATTCATTGCAAGTGTCTCTAACAGGAGCATTGAGGACTAAGGTGGACACCAGTGGCGCCAATGTCATGGTAGCATTATATGAAAGTGGTTTGGTCACTGACTGTCCAAGAGGGGAGAACAAAGGACGTATTCTATCCAACGACTATGTTGTCAGAAAGCTCGAAAAACTCTGCACTGTCAAAGACATCTCTCACAAGAAAACAGTATCAGGAACAGTTAATTTTCCCCTGTGGGAAGGATTCAACAGCAGCAAATGTGGGTTGGCTGTCTTTGTTCAGAACAGCTCTCACCAGGTTTTTGGTTCACAGAGTTTTCAACTACCGGAAGACATATGA 825 0.543 MAPHLWSCFTRKGSNRGDGIAERRVSTADIASESSRGGGGQGAVVVEMFSSQGCATSPEAELLLSRLGRGDFELEVPVVVLIFHVDYWDYVGWKDPFGLSQWTVRQKAYVEALGLDTIFTPQVVVQGKAHCVGNDENALIETITNAPRFPAPTLQATFTKPAPDSLQVSLTGALRTKVDTSGANVMVALYESGLVTDCPRGENKGRILSNDYVVRKLEKLCTVKDISHKKTVSGTVNFPLWEGFNSSKCGLAVFVQNSSHQVFGSQSFQLPEDI 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01147 274 SUPERFAMILY Thioredoxin-like 40 260 IPR036249 -
Vimu5g01147 274 PANTHER - 1 274 IPR010634 -
Vimu5g01147 274 Pfam Protein of unknown function (DUF1223) 45 256 IPR010634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01147 Vimu-Chr5 19243636 19245860 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01147 - - pvu:PHAVU_011G138400g 513.457