Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01117 ATGGATATTTGCCGGGACCTCTGCAAGTGTTGCCTCGGCATCGTCTTCTCCCTGGGTTTCTCGGCGCTCTTCCTCTGGCTCAGTCTCCGCACGGACCCTCCCAAATGCTCCCTCCAATCTCTCTCTCTTCTCGCCCAAAACGACACCCTCGTCTTCCAACTTTCCCTTCAAAACCACAACAAGGACAAGGGCGTCAAATACGCCGTCGTTCTCCTCACCTTCGCGCTCTTCCTCGACAACACCACCACGCGCCCTCTGGCCAACGCCACGCTCCTCCCATTCTACCAGGGACGCGGAAAAACCGCGCGCAAGTGGGGTTCCGCCGTGGTGCCGCGCTTAGCCCGACTCAACCGCACGGCGGCGGTGAAGAACGGGAATGTGTTCCTGCGCGTGGAGTTCGCTACTCGGGTGAAGTACAAGGTGTGGCTGTCGTTTTACATTAAACGGCACCATTTGGTCGGAGGGGCTAATGTTGAGATTAATGCTAGCTCCGGGGAGAAGGTGGACCCTAAAGCGATTAGGCTCGGAGACGTTCCTCCCAGGCTCGGGTCCGGAGCTGCGGTGGTTCGGAGTTCGTATGTGGCGGTTGTTGGAGTTTTTGTCACAGTTTTTTTTCTCACTTGA 624 0.5721 MDICRDLCKCCLGIVFSLGFSALFLWLSLRTDPPKCSLQSLSLLAQNDTLVFQLSLQNHNKDKGVKYAVVLLTFALFLDNTTTRPLANATLLPFYQGRGKTARKWGSAVVPRLARLNRTAAVKNGNVFLRVEFATRVKYKVWLSFYIKRHHLVGGANVEINASSGEKVDPKAIRLGDVPPRLGSGAAVVRSSYVAVVGVFVTVFFLT 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01117 207 PANTHER OS05G0367900 PROTEIN 4 167 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01117 Vimu-Chr5 18805593 18806216 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01117 - - gsj:114417045 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01117 5 18805593 18806216 Vimu5g01117 5 18805593 18806216 ECH
Vimu4g01221 4 11283059 11285836 Vimu5g01117 5 18805593 18806216 PCT