Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01112 ATGTTATCTGAATATTTCTTTGTTTTCCAGATTCACCTCCAAGAAGAAACCTGCCTCAAGATATCATCATTCTTAGCTGATGATATTGTTGTGAATCCTGGTGACATTTTACCAGATTTCTCAGTAAAATCTTTTACTTTCAATCTCAAGGGTCTGGATCTTACAGTTCCTTTGGATAAGACCTATCTGGATATTTCTAAAACCAATATGAACAATACAGTCAATAACTCTTTTGCTGGAGCAAGGCTTCGGATTGAAAATCTTTTCTTTTTAGATTCACCCTCATTGAAACTGAAAATATTGAACCTCGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAGGGTCAACCAATTGATCCCAGTCAGAAGAAGTGGACTACTGGAGCATCCCAGATTACTTTATCTCTGGAAGTAAGTACTGACAAGCCTGGACATCAGAGCTCTCTCGGATGGACATCTGGATTGTGGAGATGTGTTGACCTGAAAGATGCTTGCATAGAAGCGGCTATGGTAACTGCTGATGGTAGTCCATTGTTAAAGGTTCCTCCTCCAGGGGGTATCGTGAGGCTTGGTATTGCTTGTGAACAGTATCTATCCAACACTTCAGTTGAACAATTATTTTTTGTCCTCGGTGTCTATGATTATTTTGGGACTGTTAGTGATAAAATAGCCATAGTTGGAAAAAAGAAACAATTGAAGGATGTCAGGAACAAATATTTGAGTGGAAATCTGATGGAGAATATTCCCAGTGACACTTCTGTAAGTTTGACGGTAAAAAATCTCCAACTTCAATTTCTTGAGTCGTCTTCTGTGAACTCTGAGGGATTGCCTCTAGTACAGTTTGTTGGAGATGATTTTTTTGTTAGTGTTACTCATAGAACTCTTGGTGGTGCTATTGCTGTTTCATCCACAATAAATTGGGAGAGAGTTCAGATAGATTGTGTGGATTCTGAAGAGCATTTTACATGTGAAAATGACTCACCTTGTAGTACTAGCGAAAATCTTCCCTCAATAAGTGATCATGAACACCCTAAACTGAGACCTGTTTTCTGGGTGCATAACAAAAAACAGCTACTTAATGGAAATGCTCATTCATATCCCTTTCTGGACATACATATGGTGCAAGTCATACCATTTTGTGTAGTAGACACGGAAGTACATACTTTAAATGTCTCAGCTTCTGTATCTGGTGTTCGTCTTGGTGGGGGAATGAACTACTCTGAGGTCCTCCTGCATCGATTTGGAGTACTAGGGCCTGATGGTGGTCCAGGGAATGGTTTGTGTAAAGGGTGGGAAAACTTACGAACTGGACCATTGGCAAAACTTTTTAAGACAACACCTCAGATAGTTGATAATTTAGAAAATGTTTTCTTACAAACATTTACACCAGTTGAAACTACAAGAGAAGGGAAAGGTACCGGTTTTTCACACTTGAAGAAGCCAGATACCGTGGATATAACTATACAGTTGAGAGACTGGTTATTTGCTCTTGAAGGTGCGCAAGACATGGCTGAAAGATGGCGGTTCTCAAGCTATGGTGCAAACAGAGAAGAGAGGTGTTGGCACACAACATTCCGTACCTTGCGGGTAAATGCAAAAAGTTGCCCAAAGAATGCTCCAGAAAGAAAAACACAATCACACAGAATACAACTATATCCTGTGGACGTGGTTACGGTTGGAGTTCAAGGGTTGAAAATCATTAAGCCTCAAGCCCAAAAGGACATTCCTTCATCAGTCAGAACCGAAAATGGAGTAGAACAATTCACTGAAGAAGTTGAGGGAATTGATCTTGAAGTAGACATGATATTACGTGAGGATAATGAAATGGTTAATTGGGCAGTGGAGAATTTAAAGTTTTATATAAGACAAACGAATGAAGCAATTGTAACCAAGGAAGACGTCCAACACCTCACTTTTCTGTGCAAATCCGAAATCGATTCTGTGGGCCGAATAATAGCTGGAATTTTACGGCTATTTAAGCTTGAAAGTTCTGTGGGCCAATATGTAATTGACCGGCTTGGCAACCTAGGAAGTAAAGACATTGTCAAAAAATTATGTCCTGAGAAGCCTAGCATAGATAAAAGTGTTTCTAGAAGTGACCTCTCTCCATTACAAAACCCAACAAATGAAAGTCCAAGAAAAACTATGGAAGAAACATTAACTACGCTTGAGGAAGCAGTTGCTGGTTCACAGGCTAAGATTAGTGATTTGATATCTGACATTGGTACTTCTGAGTCTTCCTTTCAGCACCTTACTGTTATCAAAGAACTCAGTGAAAAGATTGAGTCGATGCAGGGTTTAGTGGTGCAATTGAAGAACCAACTTTAA 2328 0.3965 MLSEYFFVFQIHLQEETCLKISSFLADDIVVNPGDILPDFSVKSFTFNLKGLDLTVPLDKTYLDISKTNMNNTVNNSFAGARLRIENLFFLDSPSLKLKILNLEKDPACFCLWEGQPIDPSQKKWTTGASQITLSLEVSTDKPGHQSSLGWTSGLWRCVDLKDACIEAAMVTADGSPLLKVPPPGGIVRLGIACEQYLSNTSVEQLFFVLGVYDYFGTVSDKIAIVGKKKQLKDVRNKYLSGNLMENIPSDTSVSLTVKNLQLQFLESSSVNSEGLPLVQFVGDDFFVSVTHRTLGGAIAVSSTINWERVQIDCVDSEEHFTCENDSPCSTSENLPSISDHEHPKLRPVFWVHNKKQLLNGNAHSYPFLDIHMVQVIPFCVVDTEVHTLNVSASVSGVRLGGGMNYSEVLLHRFGVLGPDGGPGNGLCKGWENLRTGPLAKLFKTTPQIVDNLENVFLQTFTPVETTREGKGTGFSHLKKPDTVDITIQLRDWLFALEGAQDMAERWRFSSYGANREERCWHTTFRTLRVNAKSCPKNAPERKTQSHRIQLYPVDVVTVGVQGLKIIKPQAQKDIPSSVRTENGVEQFTEEVEGIDLEVDMILREDNEMVNWAVENLKFYIRQTNEAIVTKEDVQHLTFLCKSEIDSVGRIIAGILRLFKLESSVGQYVIDRLGNLGSKDIVKKLCPEKPSIDKSVSRSDLSPLQNPTNESPRKTMEETLTTLEEAVAGSQAKISDLISDIGTSESSFQHLTVIKELSEKIESMQGLVVQLKNQL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01112 775 PANTHER UNCHARACTERIZED 9 344 IPR026728 -
Vimu5g01112 775 MobiDBLite consensus disorder prediction 696 716 - -
Vimu5g01112 775 MobiDBLite consensus disorder prediction 691 716 - -
Vimu5g01112 775 Coils Coil 754 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01112 Vimu-Chr5 18723020 18726173 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01112 - - var:108339273 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01235 4 11488708 11491026 Vimu5g01112 5 18723020 18726173 PCT