Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01109 CACCAGCTTGCAGATGGAATGACTGTACAGATTCGGATGGTTAATCTATTACTTGAAACTCGTGGAAGTGCTTGTTGCCAAGGGGAAGCAACTCGGGCACCACCTGTGGCATCTATTACCATGCACAACTTTTTACTGTATACCACGAATGAAAACTGGGAGGTTGTAAATCTTAAAGAGGCACGGGAATTCTCCAGTAATAAGAAGTATATATACGTCTTCAAAAAACTAGAATGGGAATCTTTGTCTTTTGATCTTTTGCCTCATCCTGACATGTTCACGGATGCTACTTTAGGCCGCTCTCAAGAGGGAGCAAACCTGAGAGACGAGGATGGTGAAAAGCGAGTATTATTTGGAGCCGAGCGTCTTATAGAAGGAATATCGGGAGAAGCATTTATCACGGTTCAGAGAACTGAATTGAACAGTCCATTTGCACTTGAGGTTCAGTTACATGTCACTGAAGCTGTTTGCCCTGGATTAAGTGAACCAGGACTGCGTGCATTTCTTCGCTTTAAAACAGGATTACATGTTTGTCTAAACAGGGGAAATGTAGATTTCAAGGCACAGAAGCGATCAACTGAAGCTGCTAGGCATTCTATTGTCTCAATTGTTGTGGACCATATATTTCTTTGCATTAAAGACTCTGGTATGTCTTTAGCCTAA 663 0.4208 HQLADGMTVQIRMVNLLLETRGSACCQGEATRAPPVASITMHNFLLYTTNENWEVVNLKEAREFSSNKKYIYVFKKLEWESLSFDLLPHPDMFTDATLGRSQEGANLRDEDGEKRVLFGAERLIEGISGEAFITVQRTELNSPFALEVQLHVTEAVCPGLSEPGLRAFLRFKTGLHVCLNRGNVDFKAQKRSTEAARHSIVSIVVDHIFLCIKDSGMSLA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01109 220 PANTHER UNCHARACTERIZED 1 214 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01109 Vimu-Chr5 18681384 18683421 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01109 - - var:108339272 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01109 5 18681384 18683421 Vimu5g01109 5 18681384 18683421 ECH