Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01073 ATGAAAAGACTAGTCCAGAGTCACATGGCTGAGGCCAGATGGTGCCATTCCAACCACACTCCAACAGTGGAGGAGTACATGCAAGTAAGGACAACGTCCAGTGCTTACCCTCTGTTGATTACCACATCTTTCTTAGGCATGGAAGATACAACAGAGGAGATCCTTATATGGGCAACGAATGAGCCAGTACTTATTACAGCTTCTGCAGTTATGTCTAGGATCTCGGATGACATTGTTGGAGATGAGGAGAGAAAACATGTTGTTTCAAGCATTCAATGCTATATGAAGGAGCATAAAATCTCAAGGAAATGTGCCATTGAAGAACTACGCAAGTTAGTTGAGAATGCTTGGAAGGACATAAATGATGCATGCTTAGCTCCTACTCAAGTACCAATGAAATTTCTTATGCGTGCGGTCAACTTTGCACGTGTGGTCGACGCGCTTTACAAAGACAAAGATAACTATACAAATGGAGGAGGGATAATGAAAGATCACATTCAAACTTTATTAGTTAAAAAGATGTCAGTATAA 531 0.4105 MKRLVQSHMAEARWCHSNHTPTVEEYMQVRTTSSAYPLLITTSFLGMEDTTEEILIWATNEPVLITASAVMSRISDDIVGDEERKHVVSSIQCYMKEHKISRKCAIEELRKLVENAWKDINDACLAPTQVPMKFLMRAVNFARVVDALYKDKDNYTNGGGIMKDHIQTLLVKKMSV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01073 176 Gene3D Farnesyl Diphosphate Synthase 1 174 IPR008949 -
Vimu5g01073 176 PANTHER OS04G0344100 PROTEIN-RELATED 2 165 - -
Vimu5g01073 176 Pfam Terpene synthase family, metal binding domain 1 119 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vimu5g01073 176 SUPERFAMILY Terpenoid synthases 1 171 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01073 Vimu-Chr5 17496844 17497878 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01073 - K14183 pvu:PHAVU_011G1441000 276.559