Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01072 ATGTCTAACGGCAGTTTATCACTTCCAATTTCTGCCAGTGGTGAAAATACTTCCTTCAATCGACCCACTGCAAATTTTCATCCCTCAGTTTGGGGCGATCGGTTCCTTTCTGTTCCTTGTTCCGCTGAAAGTGATAGCCGTATTCAAGAGGCTAATCTATTAAAAGAAGACGTGAGGAAGAGGCTTGTCTCACCGATTGATGATAACAATTTCTCTCTTAAATTGAACTTCATTGATTCAGTCCAACGTTTGGGTGTGTCTTACCATTTTGAGCACGAAATTGACAATGCTTTATGTCAAATTTATGACATTTCAACAAAGGAGAATAATATCATAGCTCACTGTGATGATCTTTACCATACGGCTCTACTCTTTCGGCTGCTTAGACAACATGGATACCGCATTTATTCAAGTAGGTTTTCATGA 426 0.3944 MSNGSLSLPISASGENTSFNRPTANFHPSVWGDRFLSVPCSAESDSRIQEANLLKEDVRKRLVSPIDDNNFSLKLNFIDSVQRLGVSYHFEHEIDNALCQIYDISTKENNIIAHCDDLYHTALLFRLLRQHGYRIYSSRFS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01072 141 Gene3D - 69 140 IPR036965 GO:0010333|GO:0016829
Vimu5g01072 141 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 140 IPR008930 -
Vimu5g01072 141 PANTHER OS04G0344100 PROTEIN-RELATED 20 136 - -
Vimu5g01072 141 Pfam Terpene synthase, N-terminal domain 31 140 IPR001906 GO:0010333|GO:0016829
Vimu5g01072 141 Gene3D Farnesyl Diphosphate Synthase 28 68 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01072 Vimu-Chr5 17483095 17483648 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01072 K15803 - vum:124822239 243.047