Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01063 ATGAAACGTGGGTACCCGGAATCTCCTTCGACCTCGGTAGGTCCACCTCAATCCAAAGCTAGGCATGATCCTCAAGGTGGTGCAAATTTTCTTGAGGATGAAAGCACGAAGATTTTTGCTCGGAAAGTAGCTGATCATTACAGTGCAAGGTCCAACCAGACTTTGGAAGAACGGGAGGCCAGTCCAATAATTCATTTGAAGAAACTCAATAACTGGATTAAGAGCGTTTTAATTCAGCTTTATGCTCGTCGAGGAGATGCAGTACTTGATCTAGCCTGTGGCAAGGGTGGTGATCTTATCAAATGGGACAAGGCCAAAGTTGGATATTATGTTGGTATTGACATTGCCGAAGGTTCGATCAAAGACTGTCGAACACGATACAATGGTGATGCTGACCATCATCAGCGACGTAAAAAGTTTACATTTCCTGCTCGCCTTATATGTGGAGATTGTTATGAGGTTCGCTTGGACAAAGTTCTTGCGGATGATGCTCCTTTTGATATTTGTAGTTGCCAGTTTGCATTGCATTACTCATGGTCTACAGAAGCTCGTGCCCGGCAAGCATTAGCTAATGTGTCAGCTTTACTTCGCCCAGGAGGCATTTTCATCGGAACTATGCCTGATGCCAATGTGATTGTCAAGAAGCTTAGAGAAGCTGAAGGATTAACTTTCGGTAACAGTGTCTATTGGGTGCGTTTTGATGAAGAATTTTCTGATAAGAAATTTAAATCTTCCAGCCCCTTTGGAATAAAGTATACGTTCCATTTGGAGGATGCTGTTGATTGTCCTGAATGGATTGTTCCCTTCCACATATTCAAGTCGTTAGCTGAAGAGTATGACTTTGAGCTTGTTTTCGCAAAGAACTCTCACGAATTTGTGCACGAGTATATGAAAAAACCGGAATTTGTGGAGCTCATGCGAAGACTAGGTGCATTGGGAGATGGAAACCAAGATAATAGTGTTGTAGTTCGTGGGAATCCTAGTAATGTAGTACTTGTGCATACTTCTATATCAGGTACACTCTCAGGTGATGAATGGGAGGCAGCATATTTATACATGTCATTTGTATTGAGAAAGCGAGGTCAACCTGACAAAAGCCAACAGGGTAGCAGAAGGGATCGTGGGTCCATGCACATTGCAGAGGAAGACATCATGTACATTACTGATAACTGA 1173 0.428 MKRGYPESPSTSVGPPQSKARHDPQGGANFLEDESTKIFARKVADHYSARSNQTLEEREASPIIHLKKLNNWIKSVLIQLYARRGDAVLDLACGKGGDLIKWDKAKVGYYVGIDIAEGSIKDCRTRYNGDADHHQRRKKFTFPARLICGDCYEVRLDKVLADDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIVKKLREAEGLTFGNSVYWVRFDEEFSDKKFKSSSPFGIKYTFHLEDAVDCPEWIVPFHIFKSLAEEYDFELVFAKNSHEFVHEYMKKPEFVELMRRLGALGDGNQDNSVVVRGNPSNVVLVHTSISGTLSGDEWEAAYLYMSFVLRKRGQPDKSQQGSRRDRGSMHIAEEDIMYITDN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01063 390 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 366 IPR004971 -
Vimu5g01063 390 CDD AdoMet_MTases 88 203 - -
Vimu5g01063 390 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 40 360 IPR039753 GO:0004482
Vimu5g01063 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 359 IPR029063 -
Vimu5g01063 390 FunFam mRNA cap guanine-N7 methyltransferase 58 361 - -
Vimu5g01063 390 PIRSF ABD1 7 362 IPR016899 GO:0004482|GO:0006370
Vimu5g01063 390 Gene3D Vaccinia Virus protein VP39 59 361 IPR029063 -
Vimu5g01063 390 Pfam mRNA capping enzyme 33 360 IPR004971 -
Vimu5g01063 390 MobiDBLite consensus disorder prediction 1 30 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01063 K00565 - gmx:100779811 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01063 5 17206849 17216691 Vimu5g01063 5 17206849 17216691 ECH