Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01057 ATGGCAGCACCAATCTTTAACACTCCCTCCTTCACACTCTTTGTTTTTCTCTCTCTCCAACTTTATCTCTCTTTCTCGTCCTCTCCCTCCATCCATGAACTTCTCCGTTCCAAAGGACTACCCCCTGGTCTCTTGCCAGAAGAGGTAAAGTCCTACACTTTCTCTCAAAATGGCCACTTGGAAGTCTTCCTAGATGCACCTTGCTTGACCAAGTACGAGAACAGAGTCCTCTTTGAGCAAGTCTTCACTGCCAACCTCACCTATGGTAGCCTCATAGGAGTTGAGGGTCTCCAACAAGAAGAACTCTTTGTCTGGCTCCCTGTCAAGGACATAATCGTAAACGATCCTTCTTCAGGGTTGATACTCTTTGACATTGGCCTTGCCCACAAACAACTCTCTCTCTCCCTCTTTGAAGATCCACCTCACTGCAAGCCCGAAGGTGGGTTGAGGAATCATGTGAGGAAGGAAAAAGGTTTGGAGGTCCTGAGGTAG 492 0.4776 MAAPIFNTPSFTLFVFLSLQLYLSFSSSPSIHELLRSKGLPPGLLPEEVKSYTFSQNGHLEVFLDAPCLTKYENRVLFEQVFTANLTYGSLIGVEGLQQEELFVWLPVKDIIVNDPSSGLILFDIGLAHKQLSLSLFEDPPHCKPEGGLRNHVRKEKGLEVLR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01057 163 SUPERFAMILY At5g01610-like 11 145 IPR036758 -
Vimu5g01057 163 Gene3D - 19 144 IPR036758 -
Vimu5g01057 163 PANTHER T31J12.3 PROTEIN-RELATED 20 144 IPR007493 -
Vimu5g01057 163 Pfam Protein of unknown function, DUF538 32 138 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01057 Vimu-Chr5 17126777 17129086 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g01057 - - gmx:100790931 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01057 5 17126777 17129086 Vimu5g01057 5 17126777 17129086 ECH