Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00808 ATGGTGGAAATACTCTTCATCATCTCCATCTTTGTCTCTTCATTTTTTCCTTCTAGTGCTTCTTTGATCATCATGACACTTGCTGGTAAAATCACCACTGAAATTGGTGTTCATGCAACTGCTGCAAAGTGGTTCAACCTCTTTGCAAAGCAACTCCATCATGTTCAAAACCTTACTGATAGAGTCCATGGAACCAAGCTGCATCGTGGTCAAGACTGGCACCACACTGAGTCCATCAAACACTGGACTTATACCATAGAAAGAACAGATGGTAAGGTTACAACATGTCAGGAGAGCATTGAATCTATTGATGAAGCAAACAAAACAATAACCTACAAACTTTTCAATGGAGACATCGATCAGCAGTTCAAGCTCTTCAAGTTCATATTTCAAGCAATCGATAAGAACAGTGGTGGTGCTATTATCAAATGGACCATTGAGTATGAGAGGGTCAGTGAGGAAGTTGATCCTCCTTATGGCTACATCGAGTATCTGCACAAATGCACTGGAGACATTGATGCTCATCTTCTCAAGGCATAG 540 0.4093 MVEILFIISIFVSSFFPSSASLIIMTLAGKITTEIGVHATAAKWFNLFAKQLHHVQNLTDRVHGTKLHRGQDWHHTESIKHWTYTIERTDGKVTTCQESIESIDEANKTITYKLFNGDIDQQFKLFKFIFQAIDKNSGGAIIKWTIEYERVSEEVDPPYGYIEYLHKCTGDIDAHLLKA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00808 179 Gene3D - 25 179 IPR023393 -
Vimu5g00808 179 Pfam Pathogenesis-related protein Bet v 1 family 27 178 IPR000916 GO:0006952
Vimu5g00808 179 SUPERFAMILY Bet v1-like 25 178 - -
Vimu5g00808 179 SMART Bet_v_1_2 26 179 IPR000916 GO:0006952
Vimu5g00808 179 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 25 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00808 Vimu-Chr5 10338073 10338889 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00808 - - pvu:PHAVU_011G182500g 280.796