Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g00800 | ATGACACTTGCTGGTAAAATCAGCACTGAAATTGGGGTTCATGCAACTGCTGCAAAGTGGTTTAACCTCTACACAACCAAACTGTATCATGTTCAAAACCTTACTGATAGAATCCATGGTGTCAAGCTGCATCATGGTCATGACTGGCATCGCAATGAGTCCATCAAACACTGGACTTATACCATAGTTGATGAAGCAAACAAAAGAATCACATACAAGCTCTTCAATGGAGACATAGATCACCAGTTTAAGATCTTTAAGCTCATATTTCAAGCTATTGAGGGTGATGGTAATGCTGTTATCAAATGGACCATTGAATATGAGAGGGTTGATGAAGAAGTTGATCCTCCATATGGCTACATAGAGTGCTTGCACAAATGCACAAGAGATATTGATGATAATCTTCTCAAGGAATAA | 417 | 0.3885 | MTLAGKISTEIGVHATAAKWFNLYTTKLYHVQNLTDRIHGVKLHHGHDWHRNESIKHWTYTIVDEANKRITYKLFNGDIDHQFKIFKLIFQAIEGDGNAVIKWTIEYERVDEEVDPPYGYIECLHKCTRDIDDNLLKE | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g00800 | 138 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 138 | IPR000916 | GO:0006952 | |
| Vimu5g00800 | 138 | SUPERFAMILY | Bet v1-like | 1 | 137 | - | - | |
| Vimu5g00800 | 138 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN | 1 | 137 | - | - | |
| Vimu5g00800 | 138 | SMART | Bet_v_1_2 | 2 | 138 | IPR000916 | GO:0006952 | |
| Vimu5g00800 | 138 | Gene3D | - | 1 | 138 | IPR023393 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu5g00800 | Vimu-Chr5 | 10250992 | 10251863 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu5g00800 | - | - | pvu:PHAVU_011G182500g | 228.024 |