Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00795 ATGTCACATTCTGGTAAACTCAGCATTGAAATTGGGGTTCATGCAACTGCTGCAAATTGGTTCAACCTATTGGCAACGCAACTCCACCATGTTCAAAACCTTACTGATGCAGTCCATGAAACAAAGCTACATCATGGTGAAGACTGGCATCACAATGAGTCCATCAAACAATGGACAAGTACCATAGCAGATGGTAAGGCTACAAAATATCACGAGAGTATTGAATCCACTGATGAAGACAACAAAACAATAACCTACAAGATCTTCGGGGAAGATTTCGAGCACAAATTTAAGGTTTTTAAGCTAATATTTCAAGCAATTGATAAAGATGAAGGTGGTGGCGTCATCAAATGGATCATTGAATATGAAACTAAAAGTGAGGAATTTGATCCTCCTTTTGGTTTCCTCGAATTCCTGTACAAAGGAAGCAGAGATGTTGATGCCAATCTTATCAAAGAATAA 462 0.3831 MSHSGKLSIEIGVHATAANWFNLLATQLHHVQNLTDAVHETKLHHGEDWHHNESIKQWTSTIADGKATKYHESIESTDEDNKTITYKIFGEDFEHKFKVFKLIFQAIDKDEGGGVIKWIIEYETKSEEFDPPFGFLEFLYKGSRDVDANLIKE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00795 153 Pfam Pathogenesis-related protein Bet v 1 family 3 153 IPR000916 GO:0006952
Vimu5g00795 153 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 152 - -
Vimu5g00795 153 Gene3D - 1 152 IPR023393 -
Vimu5g00795 153 SMART Bet_v_1_2 2 153 IPR000916 GO:0006952
Vimu5g00795 153 SUPERFAMILY Bet v1-like 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00795 Vimu-Chr5 10195817 10196984 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00795 - - vun:114170482 271.166