Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00792 ATGTCACTTGCTGGTAAACTCATCATTGAAATTGGAGTTCATGCAACTGTTGCAATGTGGTTCAACCTATTGGCAACGCACCTCCACCATGTTCAAAACCTTACTGATGCAGTCCTTGAAATAAAACCCTGGCATCACAATCAGTCCATCAATCAATGGACAAGTATCATAGCAGATGGTAAGGCTACAAAATATCTCGAGAGTATTGAATCCGCTGATGAAGAGAACAAAACAATAACCTTCAAGATCTTCGGGGAAGATTTCGAGCACAAATTTAAGGTTTTTAAGGTAATATTTCAAGCAATTGATAAAGATGAAGGTGGTGGCGTCATCAAATGGATCATTGAATATGAAACTAAAAGTGAGGAATTTGATCCTCCTTTTGGTTTCCTCGAATTCCTGTACAAAGGAAGCAGAGATGTTGATGCCAATCTTATCAAAGAATAA 447 0.3803 MSLAGKLIIEIGVHATVAMWFNLLATHLHHVQNLTDAVLEIKPWHHNQSINQWTSIIADGKATKYLESIESADEENKTITFKIFGEDFEHKFKVFKVIFQAIDKDEGGGVIKWIIEYETKSEEFDPPFGFLEFLYKGSRDVDANLIKE 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00792 148 Pfam Pathogenesis-related protein Bet v 1 family 3 148 IPR000916 GO:0006952
Vimu5g00792 148 SMART Bet_v_1_2 2 148 IPR000916 GO:0006952
Vimu5g00792 148 SUPERFAMILY Bet v1-like 1 147 - -
Vimu5g00792 148 Gene3D - 1 148 IPR023393 -
Vimu5g00792 148 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00792 Vimu-Chr5 10095411 10096175 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00792 - - vun:114170482 229.18