Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00790 ATGTCACTTGCTGGTAAACTCAGCATTGAAATTGGAGTTCATGCAACTGCTGCAAAGTGGTTCAACCTATTGGCAACGCACCTCCACCATGTTCAAAACCTTACTGATGCAGTCCTTGAAATAAAACACTGGCATCACAATCAGTCCATCAATCAATGGACAAGTATCATAGCAGATGGTAAGGCTACAAAATATCTCGAGAGTATTGAATCCGCTGATGAAGACAACAAAACAATAACCTTCAAGATCTTCGGGGAAGATTTCGAGCACAAATTTAAGGTTTTTAAGGTAATATTTCAAGCAATTGATAAAGATGAAGGTGGTGGCGTCATCAAATGGATCATTGAATATGAAACTAAGAGTGAGGAATTTGATCCTCCATTTGGCTTCCTCCAATTCGTGTACAAAGGAAGCAGAGATATTGATGCCAATCTTATCAAAGCATAG 447 0.3893 MSLAGKLSIEIGVHATAAKWFNLLATHLHHVQNLTDAVLEIKHWHHNQSINQWTSIIADGKATKYLESIESADEDNKTITFKIFGEDFEHKFKVFKVIFQAIDKDEGGGVIKWIIEYETKSEEFDPPFGFLQFVYKGSRDIDANLIKA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00790 148 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 147 - -
Vimu5g00790 148 Gene3D - 1 148 IPR023393 -
Vimu5g00790 148 SUPERFAMILY Bet v1-like 1 147 - -
Vimu5g00790 148 Pfam Pathogenesis-related protein Bet v 1 family 3 147 IPR000916 GO:0006952
Vimu5g00790 148 SMART Bet_v_1_2 2 148 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00790 Vimu-Chr5 10071413 10072171 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00790 - - vun:114170482 238.424