Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00783 ATGTCACTTACTGGAAAAATTAGCACTGAACTTCCAGTTCATGCAACTCCAGACAAATGGTTCCACATCTTGACGAAAAAACTCCACCATGTTCAACACGTTGCTGGTAAAGTTCATGGAGCCAAACTCCATCAAGGTGATGATTGGCATACCAATGATTCGGTCAAACACTGGACTTATACCTTAGACGGTAAGACAGTAACATGTCTTGAAAGTATTGAATCGGTTGATGAACAGAGTAAAACAATTGTATTCAAGCTCTTTGGTGAAGCTGTCGATGATAAATATAAGCCGTTGAAGCTAACCATTGAAGTCATAGAGAAGGATGATGGCAGAACTTTAATCAAATGGACCATTGAATATGAGAAGCTAAGAGAGGATGTTCATCCTCCATATGGCTACCTGGAATTATATGACCATATGATTAAGGATATTGATGCTCATATTGTCGAGGCTGAAAAAGATGCCACCAAATAA 477 0.3878 MSLTGKISTELPVHATPDKWFHILTKKLHHVQHVAGKVHGAKLHQGDDWHTNDSVKHWTYTLDGKTVTCLESIESVDEQSKTIVFKLFGEAVDDKYKPLKLTIEVIEKDDGRTLIKWTIEYEKLREDVHPPYGYLELYDHMIKDIDAHIVEAEKDATK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00783 158 Gene3D - 1 150 IPR023393 -
Vimu5g00783 158 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 151 - -
Vimu5g00783 158 SUPERFAMILY Bet v1-like 5 152 - -
Vimu5g00783 158 SMART Bet_v_1_2 2 152 IPR000916 GO:0006952
Vimu5g00783 158 Pfam Pathogenesis-related protein Bet v 1 family 3 151 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00783 Vimu-Chr5 9855734 9857322 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00783 - - pvu:PHAVU_011G183900g 266.544