Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g00781 | ATGATTGGTTATCGTAAAACAACAGACGGTAAGACAGTAACATGTCTTGAAAGTATTGAATCGGTTGATGAACAAAACAAAACAATTGTATTCAAGCTGTTTGGTGAAGCTGTCGATGATAAATATAAGCCATTGAAGCTAACCTTTGAAGCCATAGAGAAGGATGGTGGCAGAGCTGCAATCAAATGGACTATTGAATATGAGAAGCTAAGAGAGGATGTTCATCCTCCATATGGCTACCTAGAATTATATGACCATGTCATTAAGGATGTTGATGCTCATATTGTCGAGGCTGAAAAAGATGCTACCAAATAA | 315 | 0.3714 | MIGYRKTTDGKTVTCLESIESVDEQNKTIVFKLFGEAVDDKYKPLKLTFEAIEKDGGRAAIKWTIEYEKLREDVHPPYGYLELYDHVIKDVDAHIVEAEKDATK | 104 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g00781 | 104 | SMART | Bet_v_1_2 | 1 | 98 | IPR000916 | GO:0006952 | |
| Vimu5g00781 | 104 | Pfam | Pathogenesis-related protein Bet v 1 family | 7 | 97 | IPR000916 | GO:0006952 | |
| Vimu5g00781 | 104 | Gene3D | - | 2 | 99 | IPR023393 | - | |
| Vimu5g00781 | 104 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN | 7 | 97 | - | - | |
| Vimu5g00781 | 104 | SUPERFAMILY | Bet v1-like | 12 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu5g00781 | Vimu-Chr5 | 9771703 | 9772017 | Proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu5g00781 | - | - | pvu:PHAVU_011G183900g | 155.221 |