Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00778 ATGTCACTTACTGGAAAAATTACCACTGAACTTCCAATTGATGAAACTGCAGACGAATGGTTCGACACCTTCAGAAATCAATTCCAACATATTCAAGACATTGTTGGTAACGTTCATGGAGCCAGGCTCCTTCAAGGTGATGATTGGCATGCCAATGATTCGGTCAAACACTGGACTTATACCGTAGCTATAGATCATAAATATAAGGTCTTTAACCTAACCTTTGAAGCCATTGAAAAGGATGATGGCAGTGCTGCAATTAAATGGAGTATTGAATATGAGAAAGTGAGTGAAGATGTTCATCCCCCATATGGCTACTTGGAATTCTATGACCATGTCACTAAAGATGTTGATGCTCATCTTGTCAAGGCTCCAAAAAATGCCACAAAATAA 393 0.3893 MSLTGKITTELPIDETADEWFDTFRNQFQHIQDIVGNVHGARLLQGDDWHANDSVKHWTYTVAIDHKYKVFNLTFEAIEKDDGSAAIKWSIEYEKVSEDVHPPYGYLEFYDHVTKDVDAHLVKAPKNATK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00778 130 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 66 124 - -
Vimu5g00778 130 SMART Bet_v_1_2 2 124 IPR000916 GO:0006952
Vimu5g00778 130 SUPERFAMILY Bet v1-like 1 123 - -
Vimu5g00778 130 Pfam Pathogenesis-related protein Bet v 1 family 64 123 IPR000916 GO:0006952
Vimu5g00778 130 Pfam Pathogenesis-related protein Bet v 1 family 3 62 IPR000916 GO:0006952
Vimu5g00778 130 Gene3D - 1 124 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00778 Vimu-Chr5 9634791 9635970 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00778 - - pvu:PHAVU_011G183900g 186.037