Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00447 ATGTCTCTGTTCGGTGCTAATTCCATCTGTGAGGTTGGCAAAGATGCAGCAGGAGTTGCTGGTAATGTGTTTGCTTTTGGGTTGTTTTTATCGCCCATACCTACATTTAGGAGAATCATCAGAAATGGGTCAACAGAAATGTTCTCAGGGCTGCCGTATGTTTATTCTCTCTTGAACTGCTTGATCTGCTTGTGGTATGGCACACCTCTTATATCACCTGATAATCTGTTGGTGACAACTGTTAATACAATTGGAGGAGTCTTTCAGCTTGTGTACATAACCATCTTCTTGATTTATGCTGAGAAAGCAAGAAAGGTGAGAATGCTTGGATTACTCTTAGCAGTTTTGGGCATGTTTGTCATCATACTAGTTGGGAGCTTGCAAATTAATGACAGTGCAATGCGACGGATGTTTGTGGGACTCTTGAGTTGTGCTTCTCTCATTTCAATGTTTGCCTCTCCATTGTTTATAATTAAATTGGTCATTCGGACAAAAAGTGTAGAATTTATGCCTTTTTATCTTTCACTTTCCACCTTCCTGATGAGCATCTCCTTCTTTCTTTACGGATTGGTCAGTGATGATACCTTCATTTATGTGCCAAATGGGATAGGAACTGTTTTAGGAATTGTGCAATTGATATTATATTTCTATTACAAGAGTTCATCCACTGAAAACTACAGACAGCCCTTGATAGTATCGTGTGAATGA 708 0.3927 MSLFGANSICEVGKDAAGVAGNVFAFGLFLSPIPTFRRIIRNGSTEMFSGLPYVYSLLNCLICLWYGTPLISPDNLLVTTVNTIGGVFQLVYITIFLIYAEKARKVRMLGLLLAVLGMFVIILVGSLQINDSAMRRMFVGLLSCASLISMFASPLFIIKLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLVSDDTFIYVPNGIGTVLGIVQLILYFYYKSSSTENYRQPLIVSCE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00447 235 Gene3D - 136 223 - -
Vimu5g00447 235 Gene3D - 12 106 - -
Vimu5g00447 235 FunFam Bidirectional sugar transporter SWEET 15 105 - -
Vimu5g00447 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016020
Vimu5g00447 235 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016020
Vimu5g00447 235 PANTHER RAG1-ACTIVATING PROTEIN 1 23 222 IPR047664 -
Vimu5g00447 235 FunFam Bidirectional sugar transporter SWEET 135 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00447 Vimu-Chr5 4351715 4352993 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00447 1 233 Miscellaneous Gene Families AT3G14770 63.675 1.32e-105 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00447 K15382 - gmx:100790469 415.616