Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00419 ATGGCGTTCACTCTCTCTCCCTCCTTTAACCTTTCCCTCACTCGTAACCGAATCACCTGCTTCTCCAAGGAGCACCGCCGCCAAGTCATCGCAAAGGAAGCGGTAGGAGATGCGACGCGTGCCGTGTCTGCGAGTGTTGTGGAGAGGATAATGAAACGGTTGAGGAGTGTGGTTCCGATGGTGATTGCGTCCGTTCAGATTAGCGCTTTGGTGCCGTTGATTGATTACGTGCCGTTAACCGGTGCTGCCGAAGCAGTTTTGTATTCGCCTGATACGAAGGTTCCGAGAACCGGGGAGGTTGCTCTAAGAAGAGCCATCCCTGCCAATGCTAATATGAAGTCTATACAGACATGGACAGTAGACCTCGAAGCTATACTGCCTGAAGCAGAATATGCACAATGGCAAGATACAATGTTACAAGAAATTGCAGGCTTAGAAGTTTACAGAAAATGGTTTAGAGGCTTGTTTGGACTTCAAGAGTTATTTGGAAAAACATTTTCATATCAAGGATTTGGCATTGCTCAAGTATTTCTGGGGAATATAGAGGTAACAAGACCTGCTGAGTCTTCCATGAAAGAGGGACAAAAATTGGGGCTAGCAGGACACTGGGAAATGAACACTTCAAAAAGAACACTTAAAGATTGCAATGCTGGTAGTGCCTTACCTCAAGTAAATCATGTTTTCCATATCGAGATAAATTGTTACTGTGCAAGGGAGCAACGCCAGGACACTCTTGAAGATATTACGTACCTTTTGAGGATTCCACAGAGAAAACCTTATGGAACAATGGAGGGGAATGTGAAGAAAGCTTTGAAGGGTTCTTGTAAGAGAAACCCACCCTCGACACAGTCACACATAGAAATCAACAGCCAAGTCATGTATGGCCAAGTTCAAAATAGGCTGGGTCAGGACCATGTTAAGTTTGTTCGGCTAGGTCTAGGCCAGGTTGAGTTGGACCTAGGCCAAGTCGGGTATGGCCAAGGTCAAAATAGGTTGGGTCACGACCATGCTAAGTTTGTCTGGCTAGGTCTAGGTTGGGCTAAGACGAGCTCATTTGAGGTTGAACCCATGTTAAGCAATGTCTGGTTGGATCTAGATCAGGTAACTTTGGTGGGTAGAGTCCAGGTCAAGATGGGATTGAGTTGGGTTGAGCGCAGGTCAATCTGGGTTGGGTCTGGTAAGCCTATGTTTGGTTGGTTAGCAGTTGATGAAAAGGATTCTATATTGGCCAGTATACCAGCAGAACTGAAGATAAAGGGATCTTTGGTACATGCATCCCTGATAGACGGAAAGGGGGGATTGCAAACTCTCCTTCAATCTATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTGCATCTACACTGGAAACTGTAGCAGAGCTAGAGTTGTTACAGGCGCCAGGATTATCTTTTTTGTTGCCCGAGCAATATGCACAACAATATCCACGGCTTTCTGGGAGAGGAACTGTCGAGTTCACCATCGAGAAAGGAGATGGTTCAACATTTTCCCCAGTTGGTGGAGAGCAGAAAAATACAGCCACTATTCAGGTTGTTATTGACGGATACTCTGCTCCATTAACTGCAGGAAATTTTGCAAAACTGGTGATGGATGGAGCCTATGATGGCGCAAAACTCAACTCTATCAACCAAGCTATTCTCTCAGATAATGGAGGTGATAAGAACAGTGGTTACAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAACATTAAGTGTGCAGGATGGAGAACTTCCAGTTCTTCCTCTATCTGTTTATGGGGCAGTTGCTATGGCTCATAACGAAGCCTCTGAAGAATATTCATCACCTTACCAGTTCTTCTTCTATCTCTACGATAAACGAAGTGCTGGTTTGGGAGGAATATCATTTGATGAAGGACAATTTTCAGTTTTTGGATACACAACCACCGGGAGAGATATTCTTCCCCAGATAAAAACTGGTGATATTATTCGTTCTGCAAAGCTAATTGAAGGCCAAGACCGTCTTGTATTACCGAAGGAAAGTTGA 2052 0.4464 MAFTLSPSFNLSLTRNRITCFSKEHRRQVIAKEAVGDATRAVSASVVERIMKRLRSVVPMVIASVQISALVPLIDYVPLTGAAEAVLYSPDTKVPRTGEVALRRAIPANANMKSIQTWTVDLEAILPEAEYAQWQDTMLQEIAGLEVYRKWFRGLFGLQELFGKTFSYQGFGIAQVFLGNIEVTRPAESSMKEGQKLGLAGHWEMNTSKRTLKDCNAGSALPQVNHVFHIEINCYCAREQRQDTLEDITYLLRIPQRKPYGTMEGNVKKALKGSCKRNPPSTQSHIEINSQVMYGQVQNRLGQDHVKFVRLGLGQVELDLGQVGYGQGQNRLGHDHAKFVWLGLGWAKTSSFEVEPMLSNVWLDLDQVTLVGRVQVKMGLSWVERRSIWVGSGKPMFGWLAVDEKDSILASIPAELKIKGSLVHASLIDGKGGLQTLLQSIKEQDADKVSVNLASTLETVAELELLQAPGLSFLLPEQYAQQYPRLSGRGTVEFTIEKGDGSTFSPVGGEQKNTATIQVVIDGYSAPLTAGNFAKLVMDGAYDGAKLNSINQAILSDNGGDKNSGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTTGRDILPQIKTGDIIRSAKLIEGQDRLVLPKES 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00419 683 Gene3D - 399 466 IPR023222 -
Vimu5g00419 683 Gene3D - 237 279 IPR023222 -
Vimu5g00419 683 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 17 122 IPR044259 -
Vimu5g00419 683 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 504 660 IPR002130 GO:0000413|GO:0003755
Vimu5g00419 683 Gene3D - 509 674 IPR029000 -
Vimu5g00419 683 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 515 664 IPR002130 GO:0000413|GO:0003755
Vimu5g00419 683 SUPERFAMILY Cyclophilin-like 516 667 IPR029000 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00419 - - gmx:100809532 531.176