Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00418 ATGGGAAAAACATCAACCAAAGAATGGACGCGGATCTACCTCATCTACGGAATGGATCAGTGCCAAACCTTCGTCTTCCTTCTCTGTCAAGCCGTTCTCTTCTCGATTCTCTCAGTACTCTACATTCACTACTTCAACCAAATCTCCACCCTTTTTGAGACCCTTCTCTCCATCGCCGCTGTAAACCGCGGCGCCGCCCGCTTCGCGGCAGGGTTCACCGGCTCCGTCACGGCGCTCTCAGCCCTCTGCCTCTTCTACGCTGCGGCGAACTTTTTCTACTCCGCAGTGCCTCTCCATTCTGAGATGGCGCAGCGAATGGTGGACACCGTCGACGAGTGGTCCACGGTGCGCTTAGCGCTTGACCTTGGCTGCTGCGGCCGCGGCATTTTGCTGAATTCATTAGCCGCCCGCCTTAAAAAGGAAGGAGGTTCGGGTCGGGTGATTGGATTCAGCGGTCCGAATAAGGCCAGGTTAGCGGCGACGCTTCGGGCCGCTAAGGTAGAGGGAGTGGAGAAGTATGTGACATGCCGCACAGGCGACCCGACCAAACTGCCGTTCTTGGACGGCAGCTTCCACGTTGTGGTGTCCGGGACGTTTTTGCACACGGTAGGGAGGGGGCTCAGGGCGGAGGTGGCTGCGGCGGAGAGGGGAAGGGCGATGGCGGAGATGGTGAGGGTGTTGAAGGAGGGTGGCGTAGGGGTGGTGTGGGACCTTGTGCACGTGCCGGAGTACGTGCGGCGGTTGCAAGACATGAAAATGGAAGACATAAGAGTGAGCGAGCGCGTGACTGCGTTCATGGTTAGCAGCCACGTCGTGTCGTTCAGAAAGCCCACTCAACACCTGCATGGCCCACCTGAGGTTAGGTTGGATTGGAGATTCTGCTGA 885 0.5797 MGKTSTKEWTRIYLIYGMDQCQTFVFLLCQAVLFSILSVLYIHYFNQISTLFETLLSIAAVNRGAARFAAGFTGSVTALSALCLFYAAANFFYSAVPLHSEMAQRMVDTVDEWSTVRLALDLGCCGRGILLNSLAARLKKEGGSGRVIGFSGPNKARLAATLRAAKVEGVEKYVTCRTGDPTKLPFLDGSFHVVVSGTFLHTVGRGLRAEVAAAERGRAMAEMVRVLKEGGVGVVWDLVHVPEYVRRLQDMKMEDIRVSERVTAFMVSSHVVSFRKPTQHLHGPPEVRLDWRFC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00418 294 PANTHER EXPRESSED PROTEIN 1 292 - -
Vimu5g00418 294 Pfam Methyltransferase domain 120 233 IPR013216 GO:0008168
Vimu5g00418 294 Gene3D Vaccinia Virus protein VP39 81 276 IPR029063 -
Vimu5g00418 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 98 259 IPR029063 -
Vimu5g00418 294 CDD AdoMet_MTases 120 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00418 Vimu-Chr5 3979525 3980409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00418 - - vun:114170072 517.309