Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00370 ATGATGGCTTCCAAACAAATGCTTGCAAGCAAGCCTGCTGGAATCTTCTACGCTACCAGTTCCCAAGGCAGTGGACAAGAGACAGCAGCGCTTACTGCTATCACTCAGCTGGCTCATCATGGAATGATATTTGTTCCAATAGTTTACACATTCGGTTCTGGCATGTTTGAGATGAGCGAGCTGAAAGATGGAAGTCCTTATGGTGCAGGAACTTACACTGGTGATGGCTCTAGAAATCCAACTGGGCTTGAGTTGCAGCAAGCATTCAACCAAGGGAAACATATTGTCAACATTGCAAAGCAGCTCAAGGAAGATATTGATATTCACCAAATTTTTAAACTAGATAACAGAGGATATTGA 360 0.4306 MMASKQMLASKPAGIFYATSSQGSGQETAALTAITQLAHHGMIFVPIVYTFGSGMFEMSELKDGSPYGAGTYTGDGSRNPTGLELQQAFNQGKHIVNIAKQLKEDIDIHQIFKLDNRGY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00370 119 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 103 - -
Vimu5g00370 119 Gene3D - 1 105 IPR029039 -
Vimu5g00370 119 SUPERFAMILY Flavoproteins 5 103 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00370 Vimu-Chr5 3340755 3341485 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00370 K03809 - gmx:102662143 172.17