Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00355 ATGATGATTATATGTTCTACCTTTTTAACACCCAACCACCTTCAGCTCCTGCTCCCAATGGACAAGGCTTGGAGAATATGGTACGAAGGAAAATGTTTGGAATTGATGGATCCAATACTAGAAAAATCCTTCATAGGCAGTGAAGTACAGAGGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGACGCAAGGGATAGACCAACCATGTCCGATGTTGTGGTAATGCTGGTGAGTGACACAGTGGCCATTCCAAAACCCAGGCACCCAGCATTTTCAGTTGGAAGAATGGTCTCAGAGAAAGGCTCCACATTAAGAAGTTCCAACAATCTTTCCATTTATGATATAACATCCTCCATTTCTTTACCTAGGTAA 375 0.4187 MMIICSTFLTPNHLQLLLPMDKAWRIWYEGKCLELMDPILEKSFIGSEVQRCIQIGLLCVQEDARDRPTMSDVVVMLVSDTVAIPKPRHPAFSVGRMVSEKGSTLRSSNNLSIYDITSSISLPR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00355 124 Gene3D Transferase(Phosphotransferase) domain 1 3 89 - -
Vimu5g00355 124 SUPERFAMILY Protein kinase-like (PK-like) 10 90 IPR011009 -
Vimu5g00355 124 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00355 Vimu-Chr5 3188732 3193150 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00355 23 124 Receptor kinase-like Gene Family AT4G23150 46.296 2.27e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu5g00355 - - pvu:PHAVU_011G194300g 154.066