Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01890 ATGTCCACCCACGCCGTTTGGCTCCTCTTCCTCGTCGCCTTCTCCGTCTGCCCTCTTCCCTCCGCCGGGACCCGCTCGTCGATCCTCCTCCCGAGTCGACTCGGCCTTGGCTCGCCGTCCAGTTGCCGCGCTCCTGATCCCAACCTCTATTACCAGCCGGTCATCGGAATCGTCAGCCATCCTGGCGACGGCGCCTCCGGACGCCTCAGCAACGCCACCGACGTCTCCTACATCGCTGCCTCCTACGTGAAGTTCGTGGAAGCCGCTGGCGCCCGAGTTGTTCCCCTCATCTACACCGAGCCGCCGGAGAAGCTTCTGAAGAAGCTCGAATTGGTAAATGGAGTTCTCTTCACTGGTGGATGGGCTAAAAGTGGTTTATATTTTGAAACTGTTACGAAAATATTTAAGAAAATTTTAGAGAAAAATGATGCTGGAGATCATTTCCCATTATATGCAGTTTGCTTAGGTTTTGAACTCATAACGATGATCATAAGTCAGGACAATAATATTCTTGAAGAGTTTTCTGCATCAGATCAAGCAAGTACTATTCAATTTGTGGAGAGTGCAAAAATCGAAGAAACTGTTTTTCAAAGATTTCCTCCAGAGTTGTTAAGGAAGATGACTACAGATTGTCTTGTCATGCAAAACCATCATAAAAATGCCTTTGAATGGGGTTCACCAAGAATCCCACACACTGAAGATGCCATTCAGATAACTCAGCATGCTGCAAATTTTTTGGTCAGGCTAAATGAGTTCTCCAGAGTAGTTGCCAGAGCAGTGAAAAAACCGAATGAAGCAATATTTGCTTACTACTTATATTGTGAAGCTAGGAAATCCTTAAACAGACCAGTTACTCAAGAATTGCTAGACAATCTCATTTACAATTACAGTCCCACTTATGGTGGGAAGGCTGGGCAAACTTGTCGAGTTCTCCTTTCTACTCAGCCATGTTGCCAAATTGTCCTTGAGCTTGGCACCTGA 981 0.4659 MSTHAVWLLFLVAFSVCPLPSAGTRSSILLPSRLGLGSPSSCRAPDPNLYYQPVIGIVSHPGDGASGRLSNATDVSYIAASYVKFVEAAGARVVPLIYTEPPEKLLKKLELVNGVLFTGGWAKSGLYFETVTKIFKKILEKNDAGDHFPLYAVCLGFELITMIISQDNNILEEFSASDQASTIQFVESAKIEETVFQRFPPELLRKMTTDCLVMQNHHKNAFEWGSPRIPHTEDAIQITQHAANFLVRLNEFSRVVARAVKKPNEAIFAYYLYCEARKSLNRPVTQELLDNLIYNYSPTYGGKAGQTCRVLLSTQPCCQIVLELGT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01890 326 Gene3D - 220 312 IPR029062 -
Vimu4g01890 326 Gene3D - 51 219 IPR029062 -
Vimu4g01890 326 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 219 250 IPR015527 GO:0008242
Vimu4g01890 326 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 44 326 IPR015527 GO:0008242
Vimu4g01890 326 Pfam Peptidase C26 53 162 IPR011697 GO:0016787
Vimu4g01890 326 SUPERFAMILY Class I glutamine amidotransferase-like 73 241 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01890 Vimu-Chr4 20784387 20791813 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01890 K01307 - gmx:100796947 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01890 4 20784387 20791813 Vimu4g01890 4 20784387 20791813 ECH