Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01886 ATGGGTTGTGCTGGATCTTCACAATCCAAGCCTGATGGTTTAGTGAAAAAGATCCGGAAGCCTAAGCCATGGAAGCATCCTCAGCCAATAACGAAGACTCAGCTAACGCAATTACGTGATGAGTTTTGGGACACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCTGAGGCTGATCTAACTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTAATTGTCCAAAGTTCTGATTTGACAGTATGTTATGATGAAAGAGGTAATTGTTTCATGTTGTATTCCATTATCTACAAATAG 318 0.434 MGCAGSSQSKPDGLVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGNCFMLYSIIYK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01886 105 Gene3D - 31 103 IPR038169 -
Vimu4g01886 105 MobiDBLite consensus disorder prediction 1 31 - -
Vimu4g01886 105 Pfam Ubiquitin-binding domain 16 103 IPR032752 -
Vimu4g01886 105 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 15 100 IPR039869 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01886 - - gmx:100306399 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01886 4 20756991 20760258 Vimu4g01886 4 20756991 20760258 ECH