Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01397 ATGCTTGTTGGTTTGAGTGGGGCATTGGAAACATTGTGTGGCCAAGGATTTGGTGCAAAGGAATACCATATGCTGGGAATTTACCTACAAGCCTCATGCATCATATCTCTCATTTTTTCTATCATTGTATCCATTATTTGGTTCTATACAGAACCCATCCTGGTGTTGCTTCACCAATCTCATGACATTGCAAGAACAGCTGCTCTTTATATGAGGTTTTTTATCCCAGGATTGTTTGCATATAGCTTCTTGCAAAACATGTTGAGGTTTCTTCAGACACAATCTGTAGTAATGCCATTGGTTCTACTCTCAGCTCTTCCATTGCTTCTTCATATTGGCATTGCATATGCCTTGGTTCAGGGGTCAGGTCTCTATTTCACAGGTGCACCAGCTGCAGCTTCTATTTCCCTATGGATATCAATGCTATTACTAGCTTTGTATGTAATATATGCTAAGAAGTTCAGGCAGACATGGCAAGGATTTTCAATGGATTCATTCAATTACGTACTTACAAACATGAAACTAGCTCTACCTTCTGCCGCAATGGTATGGTATGAACCACAAAACAACCCTTCACTCTTTTGTGTATCAATATCAGTTCCTACTTACTATTTATTATTTATGTAA 627 0.3876 MLVGLSGALETLCGQGFGAKEYHMLGIYLQASCIISLIFSIIVSIIWFYTEPILVLLHQSHDIARTAALYMRFFIPGLFAYSFLQNMLRFLQTQSVVMPLVLLSALPLLLHIGIAYALVQGSGLYFTGAPAAASISLWISMLLLALYVIYAKKFRQTWQGFSMDSFNYVLTNMKLALPSAAMVWYEPQNNPSLFCVSISVPTYYLLFM 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01397 208 Pfam MatE 2 116 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vimu4g01397 208 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01397 Vimu-Chr4 14415579 14416688 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01397 K03327 - gmx:100808113 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01397 4 14415579 14416688 Vimu4g01397 4 14415579 14416688 ECH