Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01382 ATGGCGGTTGAGGTTGCCGGATTTGAGATGGTTCAAGGACCAGTGGAGAATGGTGCTGAAGGAGGAAAAACTGTTTTACATGAGAAGGAGAATGGAAAGCTAGAAAAAGATGTAGGAGCTGTGGAGGCCATAAAATTTGGGTCACATGGAGATGAATCGGCAAAAGGGAATGATGTTTCTGAGGTGAATGTGCCGAGAGATGCTGCGGAAGAGTGGCCTGCACCTAAGCAGATTCATTCTTATTATTTTGTCAGGTGGCGGCCTTATGAGGATCCAACCATAAAGTCTAAAATTGATTTGCTTGACAAAGAGATTACCAAGAAAAATCAAGCTCGCTTTCAGATCACTGAAGCACTGAAGGCAAAGCGGTCAGGACGAGCCGAGTTGATTTCTCAAATCAAGTCTCTAAGAGGTGACAGTAGGCAATTTCAGAGTATTGTGGATGAGAAAATAAAAGAGATCGAACCTTTGCAGCAAGCACTGGGCAAGCTGCGCAATACAAATAATGTGGGCCGGGGTGGTTTGTGTTCATCTGAGGAAGAACTTAATAGTGTTATATATAGTTTGCAGTACCGCATACAGCATGAGAGCATTCCATTGACTGAAGAAAAACAACTTCTCCGAGAAATCAAACAGCTTGAGGGGACAAGGGAGAAGGTTATTGCCAATGCTGCAATGAGAACCAAGTTACAGGAGTCTATGGGGCAGAAAGAAGCTATTCAAGATCAGGTCAAGCTTATAGGTGGGGATTTGGATGGAGTGAAGAAAGAGAGAGAAGCAATTCGGTCCAAAATCAAGCAAATCGATGATGCCCTGAAAGCCATTGACAAGGATATTCAGTCTCTACAGGAGGAACTGACAGCCATATCTCAGAAAAGGGACAAATCTTTTGAGAGCATGCAGCAGCTGAAAAAACAGCGTGAGGAGGGGAATTCCTATTTCTATCAAAGTCGAGCAGTTTTGAACAAAGCACGGGATCTGGCTGCAAAGAAAGATATCAATGCTCTTGATGAAGTTTCACAGACAGAGGTTGAGAAATTTATGGCACTCTGGAACAATGACAAAGCATTCAGGAATGATTATGAAAAAAGAATTTTGGCCTCATTGGATATGCGTCAGTTAAGTCGGGATGGACGGATGAGGAACCCGGATGAAAAGCCAATACTGGAAGAACCAAAACTTGCTGAAGCTGAAGCAATACCAAAAACTGTTCCAAAACAGCCAAAGGAGGAGCCTAAGCCTTCTCCACAAGAAACTTTGCCTGCTCAGAAAGAATCCAAAAGCAAAGGGAAAGATTTGAAATCCAAACCAGACATTAAGGATTCAGCAGTAACTGATGAATATGAATTTGAAAATCCCAAAAAGGTGACCCCTGCCAAGGAGCCTGAAATTGATCCGGCAAAGCTGAAAGAGATGAAGCGTGAGGAGGAAATTTTGAAAGCAAAGCAGGCCCTGGAAAGGAAGAAGAAGTTAGCTGACAAAGCTGCAGCCAAAGCAGCAATCAGAGCACAAAAGGAAGCTGAGAAGAAGCTTAAGGACCGTGAGAAGAAAGCAAAGAAGAAAGCTTCAGGTGCTACTGGAGTTGTTGCTAACCCTGAGGATGAACCAAAAGATGAAGTTACTGAGACTACTGAAGCAGAAAAGGTTGACGATGACATTCAAGCCCCTGCTCCTGTGAAGGAAAAGGTCCAAAAGGAGATTGGCATCAGGTCCAGGAACCGAGCAAGAGGCCCAGATTCTGTTCCAAAAGTTATTCTTAAGCGTAAGAAGTCTAACAATTACTGGGTGTGGGTTGCAGCTGCAGTTGCTGCTTTGTTAGTCCTTTTGGCAGTGCTTGGATACATCTATCTTTTCTGA 1857 0.4362 MAVEVAGFEMVQGPVENGAEGGKTVLHEKENGKLEKDVGAVEAIKFGSHGDESAKGNDVSEVNVPRDAAEEWPAPKQIHSYYFVRWRPYEDPTIKSKIDLLDKEITKKNQARFQITEALKAKRSGRAELISQIKSLRGDSRQFQSIVDEKIKEIEPLQQALGKLRNTNNVGRGGLCSSEEELNSVIYSLQYRIQHESIPLTEEKQLLREIKQLEGTREKVIANAAMRTKLQESMGQKEAIQDQVKLIGGDLDGVKKEREAIRSKIKQIDDALKAIDKDIQSLQEELTAISQKRDKSFESMQQLKKQREEGNSYFYQSRAVLNKARDLAAKKDINALDEVSQTEVEKFMALWNNDKAFRNDYEKRILASLDMRQLSRDGRMRNPDEKPILEEPKLAEAEAIPKTVPKQPKEEPKPSPQETLPAQKESKSKGKDLKSKPDIKDSAVTDEYEFENPKKVTPAKEPEIDPAKLKEMKREEEILKAKQALERKKKLADKAAAKAAIRAQKEAEKKLKDREKKAKKKASGATGVVANPEDEPKDEVTETTEAEKVDDDIQAPAPVKEKVQKEIGIRSRNRARGPDSVPKVILKRKKSNNYWVWVAAAVAALLVLLAVLGYIYLF 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01382 618 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 2 600 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 532 579 - -
Vimu4g01382 618 Coils Coil 474 521 - -
Vimu4g01382 618 SUPERFAMILY Tropomyosin 240 309 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 504 579 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 424 471 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 504 522 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 376 413 - -
Vimu4g01382 618 Coils Coil 203 223 - -
Vimu4g01382 618 Coils Coil 251 292 - -
Vimu4g01382 618 MobiDBLite consensus disorder prediction 376 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01382 Vimu-Chr4 14218790 14224671 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01382 - - gmx:100819875 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01382 4 14218790 14224671 Vimu4g01382 4 14218790 14224671 ECH