Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01330 ATGATGCTATTTCCCCCATTATTGGAGCTGACTCATCTACGGGTTGTCACAGTCCTTATGAGCTTTATCATGCTTGTTGCCATTCTTACATCAATTGCTATTGTTCAGCGCATCCTTATGGCAACTTCTGTCCTTAAGGCAAGCATAACTTTATTAAATGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCACTTATTATTTTTCCAATCATACCTTGTGGTATCCTTGCAGTCTTCTATATTTTCTGGATTTCTGCTGCTCTACATTTGTTCAGCTCTGGTCAGGTTGTTCAGAACAACTGCAATTCTAATTGCTGCACATATGACCTCATCGAGAAAAAGGTGATATGTGATCGGTGTTGTGGATATAGCATTCATTACACGCCGCATATTGGAGCTGCCATCCTTTTTCACCTATTTGGCTGTTATTGGGCTACACAATTTTTCATAGCTTGCTTGTCAACAGTGATTGCTGGATCTGTTGCTTCTTATTATTGGGCCCATGGTGAAGCATCTCCTGAAATTCCCTTTCTTTCAGTATTTTCCTCCATGAAGAGGCTTATGCTTTACAGTCTTGGTTCTGTGGCTCTTGGTTCTCTGACTGTATCATTTATAGAGTCAATCCGGTTTCTGCTCGAATCTATTCGCCGGAAACTAAAAGTCTCCGGTCACGTGCCTGATAGCTGGATTGGCAAAGCTGCTTACCAATCTTCTGCTATTGCAACTGAATTGATTATGAGTAACATCCTACGGATTGGACATGTGAATGTGATTGGAGATGTTATTTTGTTCCTTGGAAAACTATGTGTCAGCCTTTCAAGTGCTCTTTTTGCTTTCCTCATGTTGGACACACACAAGTACAGATCCGCACATAACAAGATATCATCTCCACTTTTGCCTGTTGTGGTTTGCTGGGCTCTTGGATATGTTGTTGCAACCCTTTTCTTTGCAGTTGTAGAGATGTCAATAGACACTATCATTCTCTCATTTTGTCAAGATTCTGAAGAGCATGGAACCGCACAGTATGCTCCACCTCTTCTCATTGAAACCCTGGGAGACCAAAATGAGACGCAGAGACTTACACAAGGATCCCAATGA 1098 0.4144 MMLFPPLLELTHLRVVTVLMSFIMLVAILTSIAIVQRILMATSVLKASITLLNVAAKVIGEVQALIIFPIIPCGILAVFYIFWISAALHLFSSGQVVQNNCNSNCCTYDLIEKKVICDRCCGYSIHYTPHIGAAILFHLFGCYWATQFFIACLSTVIAGSVASYYWAHGEASPEIPFLSVFSSMKRLMLYSLGSVALGSLTVSFIESIRFLLESIRRKLKVSGHVPDSWIGKAAYQSSAIATELIMSNILRIGHVNVIGDVILFLGKLCVSLSSALFAFLMLDTHKYRSAHNKISSPLLPVVVCWALGYVVATLFFAVVEMSIDTIILSFCQDSEEHGTAQYAPPLLIETLGDQNETQRLTQGSQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01330 365 Pfam Plasma-membrane choline transporter 23 222 IPR007603 GO:0022857|GO:0055085
Vimu4g01330 365 Pfam Plasma-membrane choline transporter 235 335 IPR007603 GO:0022857|GO:0055085
Vimu4g01330 365 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 14 359 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01330 Vimu-Chr4 13309832 13319355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01330 K15377 - gmx:100779959 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01330 4 13309832 13319355 Vimu4g01330 4 13309832 13319355 ECH