Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01226 ATGGCCCAAGAGAAAGAGTCTAGGCCCATCTTCCATAGACGCCTCCAACTCTTCATGAATGTGCTAGGTCATGTTGAGAGGTTATACAATGGTGTGGTGGTTGTGATCCATGGGGGTGCTGTGGATATTGGAGGAGGAAGAATGAAGAAGAAGGTGGTGACAGAGAGTTCTTCGAGAGATAATATTTCAACTAAACATCTAATCGGCATTGGAGCTGCCCAAACATTGGTTCCTGTGGTGGGATCGTTGGCTCCGGCAAAAAAGAAAGAATACAGAATCACCAATCGCCTCCAAGAGGGGCAACGTCCTATATACGCTGTCGCTTTCAACTTCCTTGACTCTCGTTACCTCAACGTTTTCGTCACTGTTGGTGGCAACAGAGATGAATCTCTTCGGTTGTGGAATACTCAAACTGGATTATGTATCCTGATATTTGCAGGAGCTGGAGGACACCGCAATGAAATCCTAAGTGTTGTATACAGTGCTTCGGTTCATGTAAATTATGTTGACTGTACTAGGTGGTTGGGTGATTTTATCCTTTCAAAGACTACTCTTCCTGCTGGAATTTAA 570 0.4456 MAQEKESRPIFHRRLQLFMNVLGHVERLYNGVVVVIHGGAVDIGGGRMKKKVVTESSSRDNISTKHLIGIGAAQTLVPVVGSLAPAKKKEYRITNRLQEGQRPIYAVAFNFLDSRYLNVFVTVGGNRDESLRLWNTQTGLCILIFAGAGGHRNEILSVVYSASVHVNYVDCTRWLGDFILSKTTLPAGI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01226 189 Gene3D - 85 186 IPR015943 GO:0005515
Vimu4g01226 189 PANTHER POLYCOMB PROTEIN 128 162 - -
Vimu4g01226 189 SUPERFAMILY WD40 repeat-like 93 161 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01226 Vimu-Chr4 11356003 11363583 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01226 K11462 - ming:122092885 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01226 4 11356003 11363583 Vimu4g01226 4 11356003 11363583 ECH