Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01222 ATGGTAACTGGTAAGTCAGCCAAGAAACCTGGTTCTGCGGAAATTGATGGGGCAAAGGAGTTTGAAAGAGTGCAAAATCTATCGTGGTTGTCGAGCATCTCTCAGAACAATATATTATTGCAACGGAAAGAGCAATCTCATAAAAAGAAACAAAAATATGTGTTTGAAGTCTCTCAAGAAAACCGTTTTCGGAAGTTAGTTGAAGTCTCTGCAAAAATGCTAGGACCAGAGGCTACCCTTGAATTGTTTGGTAAACTTGGACGAAAACCAGATGCGAAAGGGTACAGTGCATTGGTAGAAATGTGCATAGATAAAGCCAGGGGAACTGATGATGAAGGCATCACAATAGAACTGGGGAAGGTTTTTAACCTTTTTAAATCAATGAGGGAACAAGGTTTAGAGCTAGAGGAGCAGACGTATTGCCCACTTCTTTTGTATATAATTGATATGCGTATGGTTGAGGAGTTTCAGTTTTTCTATGTTATTATCAAAGAGGAGAATCCCAGTTCAGTTGCAAGGCTGGGTTACTATGAAATGTTGTTGTGGTTGAGAGTTAATAACGAAGAAAAGATTCAGAGTATTTGTAATTATATTGCAGAGAATGACAGTGAGGACATGTCTGATATACGAGGTAGGAGAACCTCCTTTATGTTTTTTTCCACTTGCACTATTTTGCCATAA 681 0.3862 MVTGKSAKKPGSAEIDGAKEFERVQNLSWLSSISQNNILLQRKEQSHKKKQKYVFEVSQENRFRKLVEVSAKMLGPEATLELFGKLGRKPDAKGYSALVEMCIDKARGTDDEGITIELGKVFNLFKSMREQGLELEEQTYCPLLLYIIDMRMVEEFQFFYVIIKEENPSSVARLGYYEMLLWLRVNNEEKIQSICNYIAENDSEDMSDIRGRRTSFMFFSTCTILP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01222 226 Gene3D Tetratricopeptide repeat domain 24 182 IPR011990 GO:0005515
Vimu4g01222 226 PANTHER OS02G0132600 PROTEIN 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g01222 Vimu-Chr4 11301697 11302779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01222 - - vum:124847705 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01222 4 11301697 11302779 Vimu4g01222 4 11301697 11302779 ECH