Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g01216 ATGGAGGAGCTACTCGTAGCGGTACTCTCAATGTTTCTCGTCGTAGCTTTGATCCCACTCTACCTATGGAAACGCCGTCAGGATTCTCAGCCTCCACCTCACCACGATGAACCTCCCCAGGCTCCGCGGAGAGAAGCCGTTGTGCGCACCACCGCCACTCGTCGTATGCGTCGCCGGCCTGCTGCGTCTGGAGCTAGCACGTCGGCAGATCCGCCTGCGACGGTAGAAGAATCTGATGGTGAGAGTGACGATGAAGCTGCTGGTGGAGGGTATTATGAGGCCAAAGCATCAAAGAAAAAGGAAACCAAAAGGCAAGAGAGGGAAGCACGGCGTCAGAATACAGAAGAGAATTTGTACTCAGATAGGGGTGTTGAGTGTTTAATTCAAGACAGCTCGTCTTCCCTGCATATCCTGGGCATTGCTGATGAAGCTGCACGAGAGTCAAAGCAGGCAAAACAAGATCGATATTCAGAAATGCGGAGGTTAAAGGATGAGGAGCGTGAGGCACAAGAGCGTATGTTGGAAGAGGAAGCCAAAGCTCAGAAAGCTAAGGAGGAGGAGGCTGCTGCATTGGAGTTTGAGAAGTGGAAAGGTGAATTTTCAGTTGATGAGGAAGGTACCCTTGAAGAAGCGCAGGATAGTGCTGAAGACTTGCTAACCAATTTTGTTGATTATATAAAGAAGCACAAATGTGTTCCCTTAGAAGAACTTGCTGCAGAATTTAAATTGCGAACACAGGAAATCAATGGTTATGACGGAGACAATCCCTTGGTTGCTCTAGGTGATGATGTAGAAGCCATCCAGGAGCATGATGACTTTGTTATTCAACTCATTTTGAGTCGGCTTTCAGGTGTTATGGATGACAGAGGGAAATTTATTTACATCTCCCAAGAAGAGATGAAAGCAGTTGCTGATTATATTAAGCGGCAAGGGAGGGTCAGCATTTCTCACTTAGCAAGTAAATCAAACCAGTTCATTGATTTAGAGCCTAAAGTTCAGTACACTGACGACATTAATATTGGGGAGGAGATAACTGTCAACTGA 1044 0.4684 MEELLVAVLSMFLVVALIPLYLWKRRQDSQPPPHHDEPPQAPRREAVVRTTATRRMRRRPAASGASTSADPPATVEESDGESDDEAAGGGYYEAKASKKKETKRQEREARRQNTEENLYSDRGVECLIQDSSSSLHILGIADEAARESKQAKQDRYSEMRRLKDEEREAQERMLEEEAKAQKAKEEEAAALEFEKWKGEFSVDEEGTLEEAQDSAEDLLTNFVDYIKKHKCVPLEELAAEFKLRTQEINGYDGDNPLVALGDDVEAIQEHDDFVIQLILSRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKVQYTDDINIGEEITVN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g01216 347 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 281 333 - -
Vimu4g01216 347 MobiDBLite consensus disorder prediction 27 117 - -
Vimu4g01216 347 MobiDBLite consensus disorder prediction 28 52 - -
Vimu4g01216 347 MobiDBLite consensus disorder prediction 94 117 - -
Vimu4g01216 347 SMART DDRGK_2 94 327 IPR019153 -
Vimu4g01216 347 SUPERFAMILY "Winged helix" DNA-binding domain 213 303 IPR036390 -
Vimu4g01216 347 Gene3D - 217 250 IPR036388 -
Vimu4g01216 347 Coils Coil 149 194 - -
Vimu4g01216 347 Pfam DDRGK domain 280 326 IPR019153 -
Vimu4g01216 347 Pfam DDRGK domain 142 248 IPR019153 -
Vimu4g01216 347 Coils Coil 92 117 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g01216 K23344 - gmx:100810584 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01216 4 11048088 11054486 Vimu4g01216 4 11048088 11054486 ECH