Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00905 ATGGCTAACAAAGGTCTCAAGATTTGCTTGGTCTTGTCTTTCTTATTCCTGATCATTCTTACAGCTGTGGTTGTAACCTTATTTTTAACAATTTTCAAACCCAAGGATCCTAACATCACGGTCCGACCTGTTGGTCTTGAAAACTTTAACTTGTCCCTTTTGACCAATTTGACTGCAAATGTGAGTCTGGGAATGGTGATCACTATGGAGAATCCAAACTATGGTAGCTTTGAATACCCCAAAGCCACTGGTTATGTCAATTTTGATGATAGCATTGTGGGTGAAGTTCCGATAGAGGGAGAGTTAGTGCCAGCACGTGACCAGATTGCTGTGAACACGTGGGCCAATTTCATGGTAGAAAAGTTGGTCACTGATACCAAATTTTGGACTGATGTTCTAACTGGATCGCTGAATTTCACATCAACAGCTACACTGCCAGGGAAAGTTCATATGTTCAAGATTTTTAAGTTGAAAGCCACTGTTTATACAACTTGTGACTTCTCCATTAACATAACCTCTAGGAATCTTGATAACAAATGCATTTCCAGAATCAAGCTTTAA 561 0.3957 MANKGLKICLVLSFLFLIILTAVVVTLFLTIFKPKDPNITVRPVGLENFNLSLLTNLTANVSLGMVITMENPNYGSFEYPKATGYVNFDDSIVGEVPIEGELVPARDQIAVNTWANFMVEKLVTDTKFWTDVLTGSLNFTSTATLPGKVHMFKIFKLKATVYTTCDFSINITSRNLDNKCISRIKL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00905 186 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00905 Vimu-Chr4 7480918 7481478 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00905 - - pvu:PHAVU_005G114300g 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00905 4 7480918 7481478 Vimu5g01583 5 27301355 27302627 PCT