Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00790 ATGGCGTTTGCTAAGGTTATCACAGCACTTCTTCTTGCACTCACTATGCTCAGAATTAGACCCTCTGCATGCCAAACAGTAGAAGCCAAAGTCTCTTGCACTGACTGCACTCACAACTACGATTTCTCTGGCATTATGGTCTCGGTGAAGTGTGAAGGTGTGAAAAAGCTGGCTACGGCCGCAACAGAAGAGAAGGGTTTCTTTAAGGTTGATCTTCCCAGAGACCATGGAAAAGCTTCCTCAGTGAAGTGTCTTGTGAAACTTCTTGGAGGGCCAAATCAAGTGTATGCTACAAAGAAGAACCAGGTGTCTGAAATTGTGAAGGGAAAAGAGAAAAACACTTACACGATCTCCACTCCTCTTAGCTTCTTGAGATCGTGTCCTAAAAACAGAGAATGCAAGGTTGCTGATAACCACTTCAGTTCATCCAAAACGTTGGATCTTCCTCTGCCTCCGGAGTGGGGTTTGGCACCTACCAGCTACTATCTTCCTTTTCTCCCCATCATTGGAATACCTTAG 519 0.4528 MAFAKVITALLLALTMLRIRPSACQTVEAKVSCTDCTHNYDFSGIMVSVKCEGVKKLATAATEEKGFFKVDLPRDHGKASSVKCLVKLLGGPNQVYATKKNQVSEIVKGKEKNTYTISTPLSFLRSCPKNRECKVADNHFSSSKTLDLPLPPEWGLAPTSYYLPFLPIIGIP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00790 172 Pfam Pollen protein Ole e 1 like 27 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00790 Vimu-Chr4 6229825 6230662 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00790 - - gmx:100306432 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00790 4 6229825 6230662 Vimu4g00790 4 6229825 6230662 ECH
Vimu4g00790 4 6229825 6230662 Vimu5g01717 5 28894049 28894743 PCT