Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00770 ATGCAGGAGAAGATAACTCAGCAAGGTGAATATGAATCGTTACACCGAGACATATTGAGTGCTTTTGGAAAGTGGGAATTTGGCCCCACAGAGATAGAAAATCCTTTCCCTGATGATAATGGTTCAGTCCACATATGGCAAGGCTTTGAAGATAGGATCATTCCCTACACACTGAACCGTTACATCTCTCAAAAATTACCATGGATTCTTTATCACGAGCTTCCTCATGCGGGACATTTGTTTCTCTTCAAGAAAAATGAATGCGAGTCTATTGTAAGAGCACTTGTACTCTCACCAGATATTTCTGAATAA 312 0.4006 MQEKITQQGEYESLHRDILSAFGKWEFGPTEIENPFPDDNGSVHIWQGFEDRIIPYTLNRYISQKLPWILYHELPHAGHLFLFKKNECESIVRALVLSPDISE 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00770 103 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 3 97 - -
Vimu4g00770 103 Gene3D alpha/beta hydrolase 2 96 IPR029058 -
Vimu4g00770 103 SUPERFAMILY alpha/beta-Hydrolases 33 87 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00770 Vimu-Chr4 6059352 6059663 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00770 - - vra:106758725 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00770 4 6059352 6059663 Vimu4g00770 4 6059352 6059663 ECH
Vimu4g00770 4 6059352 6059663 Vimu6g02351 6 20524475 20527119 ECH