Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00675 TTGAATTGTTCACAGAAACAGGCGAAGAAGAACGGTTATGACCACAAGAACGAGAAAGCAAAGAAGAACGAGGAAACGTCATACCCGACCACGGTTGTCTTGAAGATCGACATGCACTGTGACGAATGCGCATCAAAAATCATCAAATGCCTACACGCTTTCGGAGGTGTGGAGTGTTTGAAGCCGGAGATTAAGACAGAAAGCGTTGATCCCATCAAACCAAAGGACAAGCTTTCTGGGAAGACGAAGAAGAATGTTGATATTGCATCTCCTCTTCCCAACAAGGACAAGGAAAACAAGCCCAAAAACAATGAAAAGAAAACCAAAGACAAAGAGACTCCGGTGACAACAACGGTGCTGAAGGTGTTTAATCTTTGCCCGTGCCAAGGTTGCTCCCATAGGATTCGCAGGGCTGTGTTGAAGTTCAAAGGTGTTAAGGAAGTGAGTACAGATAGGGAGAAGGGGATGGTTATGGTTAAGGGCACAATGGACGTGACAGCTCTGGTGCAGAAGTTGTCGGAGAAGTTTAGGAGGAAGGTTGAGGTGGTTCCTGCCAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGGAAAGGAGAAGGAGAAGGAGAAGGATAAGGATAAGGAGAAAGTGAAGGAGAAGGAGAAGGAGAAGGAGAAAATAAAGGAGAAGGAGAAGGAGAAGGAAAATGAGAAGGAGAAGAAGAAGAAGGAAAATGAAAGTGAGAAAGAAGGTGACAAAGGAGGGAGTGGCTCCACCAAGAAGAAGAAAAAAGGTGGTAATGAAGGAGATAATGATAAGGATAACGAGGGAGATGGTAAAGGCCAGGCGAAAACTGAAAAAAACAATAGCAATTATATGGTACCTGCATGTGGTTATGGCTATGGTGAATACTACTACTACGTGGGGCAATATTATCCTGCATCAGAGATGTTCAGTGATGAAAATCCCCATGCTTGTCACATTATGTGA 975 0.4431 MNCSQKQAKKNGYDHKNEKAKKNEETSYPTTVVLKIDMHCDECASKIIKCLHAFGGVECLKPEIKTESVDPIKPKDKLSGKTKKNVDIASPLPNKDKENKPKNNEKKTKDKETPVTTTVLKVFNLCPCQGCSHRIRRAVLKFKGVKEVSTDREKGMVMVKGTMDVTALVQKLSEKFRRKVEVVPAKKEKEKEKEKEKGKEKEKEKDKDKEKVKEKEKEKEKIKEKEKEKENEKEKKKKENESEKEGDKGGSGSTKKKKKGGNEGDNDKDNEGDGKGQAKTEKNNSNYMVPACGYGYGEYYYYVGQYYPASEMFSDENPHACHIM 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00675 324 Gene3D - 115 191 - -
Vimu4g00675 324 Gene3D - 27 96 - -
Vimu4g00675 324 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 14 214 IPR044594 GO:0046872
Vimu4g00675 324 MobiDBLite consensus disorder prediction 9 25 - -
Vimu4g00675 324 SUPERFAMILY HMA, heavy metal-associated domain 29 68 IPR036163 GO:0046872
Vimu4g00675 324 Coils Coil 185 246 - -
Vimu4g00675 324 Pfam Heavy-metal-associated domain 128 178 IPR006121 GO:0046872
Vimu4g00675 324 SUPERFAMILY HMA, heavy metal-associated domain 116 174 IPR036163 GO:0046872
Vimu4g00675 324 ProSiteProfiles Heavy-metal-associated domain profile. 116 181 IPR006121 GO:0046872
Vimu4g00675 324 MobiDBLite consensus disorder prediction 90 113 - -
Vimu4g00675 324 MobiDBLite consensus disorder prediction 183 287 - -
Vimu4g00675 324 MobiDBLite consensus disorder prediction 70 113 - -
Vimu4g00675 324 CDD HMA 128 174 IPR006121 GO:0046872
Vimu4g00675 324 MobiDBLite consensus disorder prediction 1 25 - -
Vimu4g00675 324 MobiDBLite consensus disorder prediction 183 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00675 Vimu-Chr4 5199892 5201196 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00675 - - vra:111241509 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00675 4 5199892 5201196 Vimu5g01865 5 30501075 30501653 PCT