Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00630 ATGGCCGCCAACGTTCGCAGAGCTACCTATCGTTTTCTCCCTGCCGTAGACAGAGATTCTCTCTCCGATTCCACCTTTGAATTCGATGAATCTGATCTCTACAACTCTGCAAACGCTAACTCTTCGGAATTCTGCAAATCTGTTCGCTCCTCGCGATTCCACAGTAACTCCTCTGCTACCGTCGGCCGTGTCGGTGCTTCAGGATCACTGCCGGTGAACGTACCGGACTGGTCGAAGATCCTCGGCAACGAGTACGGACAGAACCGGAGGAGGAACTATGATTACGAAGAAGCTCAAAGCGATGAGGAAGAAGGAGGAGGGAGAGTGCCTCCGCACGAGTTTCTGGCGAAAACGAGAATCGCTTCCTTGTCAGTGCACGAAGGAGTTGGGAGAACACTCAAAGGACGCGATCTTAGTAGAGTTCGAAACGCGATTTGGGCGAAAACGGGATTCCAAGATTAG 462 0.5173 MAANVRRATYRFLPAVDRDSLSDSTFEFDESDLYNSANANSSEFCKSVRSSRFHSNSSATVGRVGASGSLPVNVPDWSKILGNEYGQNRRRNYDYEEAQSDEEEGGGRVPPHEFLAKTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00630 153 MobiDBLite consensus disorder prediction 89 110 - -
Vimu4g00630 153 PANTHER EMB|CAB72159.1 9 153 - -
Vimu4g00630 153 Pfam Senescence regulator 40 153 IPR007608 -
Vimu4g00630 153 MobiDBLite consensus disorder prediction 88 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00630 Vimu-Chr4 4671821 4672282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00630 - - gmx:100814909 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00630 4 4671821 4672282 Vimu4g00630 4 4671821 4672282 ECH
Vimu4g00630 4 4671821 4672282 Vimu5g01924 5 31136565 31137787 PCT