Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00501 ATGGGAGGCGCGTGTAGCAGCAACGCCTTCAGCGCGGTGCAATTAACTATATCATCCACCCGCAGCAGCAGATTCAGAAGCAACCGTACCGTTTCTTTGTTCTCCGTTCGAGCCTGCGACGACCCTCCTCGTGGGCCATCCTGCATATACGTTGGCCCCCTCCAGACGGCCACCAAAGAAACCCTCGAAGCTCTTTACTCTCAGGCGCGGGATGCGTATTACAGTGGAGAGCCTTTGATACTCGATGACATGTTTGATAGAGTAGAGTTGAAGCTTAAGTGGTATGGTTCTAAGTCAGTTGTCAAGTACCCTCGGTGCAGTATCCGGAGGCATTCCACGTATGCTGATTCTGATGAAGATATTTCTATGGCTTTTGCATTAGCAAGCTTATGGTCCCTATTTCTTGCACTTGGCTGTTCAGCTTGTGTTTGGCCTATATTGTACACTGTTAGCACAGCTTATCAAAAAGCATTCGACTCGGGAGGATTCTCGTATGGTAGTCAAGCATCAGGAGTAGGACTTCTTTTTGTGTTCAACGGCATTATCCTCACAGCACTCGGTTTGGTCATTGGCTACCCAGTTGCTTCAGCTTCAGTTAAGGTGCTTCAAGGCCTGTGGAGGGGTGATTTAGCGGCACTGAAGGGTTCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAACGGACAAGGGTAATAACTCACCTCATAGAGCAGATTGTCACGTGTGTGAATGCTTATTGGAATTTCGCACCAAAGCTGAGCAATCGGATTTAAGATTAGGTAGACAGTGGGTTTATGGGCGTATTTACCTTGTTCGAAGATCCCGGCGCCAGAGAGAGCCGTAA 852 0.4812 MGGACSSNAFSAVQLTISSTRSSRFRSNRTVSLFSVRACDDPPRGPSCIYVGPLQTATKETLEALYSQARDAYYSGEPLILDDMFDRVELKLKWYGSKSVVKYPRCSIRRHSTYADSDEDISMAFALASLWSLFLALGCSACVWPILYTVSTAYQKAFDSGGFSYGSQASGVGLLFVFNGIILTALGLVIGYPVASASVKVLQGLWRGDLAALKGSCPNCGEEVFAFVRTDKGNNSPHRADCHVCECLLEFRTKAEQSDLRLGRQWVYGRIYLVRRSRRQREP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00501 283 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 67 276 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00501 Vimu-Chr4 3637767 3639721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00501 - - gmx:100791480 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00501 4 3637767 3639721 Vimu4g00501 4 3637767 3639721 ECH
Vimu4g00501 4 3637767 3639721 Vimu5g02096 5 32656134 32658556 PCT