Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu4g00188 ATGATGGTGAGGGGAGGACAGTGCTTCGAGAAACTTCGGCGGTTTGCTCGGACGGTTTTCTTCGTGGCGGCATTGGTGGCGTCGCTGCTCGTGACGTCGCTGCCCGTGCTCGTCGCGGTTGTTGACGTTCTGGTCCCTTGCGTTCTCATTTCCAGCTTCACCTGTGTCAAGTGCTACGGCTTCAAGGAGCATTTGCGTCGTTACTCTTTCAAGAGCTCCTTGATGGATATTCCTCTCGTTTCGGTCGTACGATCCTTCATCATTATCTGTGTTTATTCTATTTGTGATGGCCCGGCTCTTTCGCATGGTCCTTATCTTGGAACTGTGACACTGTCTTCCTTTATCTCAATTGTCCTCCTATCTGTCAAAGCTTGTGTTTTCTCAGTAAATTCTCAGATCGAAGCAGAAGCTACTATTTCCCCCACAAGACAGAGACTCCATTTAAAGAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCTCTTGGTCACACCGTGGTTGCTTATAGAACCAGCTGCAGAGCAAGGAGGAAGCTCATGTTTCATAGAGTTGACCCCGAAGCGGTGCTTTCTTGCAAGAATGTTTTCTCTGGTTATCAAAAGGTCCCTCGGTCTCCTGTTCCCTCCGAGGGCAGAACCCCAAAAAGTGACGGTGAAATGAAAAGGAAGCCTTTTGGAACAGCTCGTGATGAAGAACTGCCACTTAGATTACTTGCAGATTCAGAGAGCTTATTCATCCCCTGCCAAGGTCTTACTCTCCATTACAAGCTCAGCTTGCCTGGTTCGCCGCCACTTAACATGTCCTCAACATTTTGCTCCACTTCATCAGTGGCTGGGGGCTTGTCAAAGTTGAATAGACATTTGACTTGCATATCTCCAAAATCCCATCGGCAACTCTACCGGAGCTATAGCAATCAATTCTATGGATCATCTCTACATGCTCCTCTTTTAGATATTCCAGTAACCTCTCCCCATCTTAATGAAGAAATCCCCGTTTTGCATCTAGATGAAATTCGTGAAGATGAGGACACAATTAAATTAGAGTCTTTGTCTTCGGAGCAAAATGTAGAGGACATTGGTCAAGTAGGTATTATTTTGATACATGGGTTTGGTGGAGGCGTCTTCTCTTGGCGACATGTAATGGGACCTCTAGCCCGGCAGAGTAATTGCACAGTTGCGGCATTTGATAGGCCTGGTTGGGGATTGACTTCAAGACTGAGCCGGGAGGACTGGGAGAAAAAGGAATTGCCTAATCCTTACAAACTTGAAAGTCAGGTTGGTCTCCTTTTGTCTTTCTGTTCTGAGATTGGATTTTCTTCAGTTGTTCTAATTGGTCATGATGATGGAGGGTTGCTTGCTCTGATGGCTGCACAGAGAGTTCAATCATCAATGAATTCTTTCAACGTTACAGTGAAAGGGGTTGTATTGTTAAATGTTAACTTATCAAGGGAAGTTGTTCCTTCCTTTGCTAAAATCCTTCTGCATACATCTCTTGGAAAGAAACATTTAGTCCGTCCCTTACTAAGAACAGAAATCACCCATGTGGTGAATCGGCGGTCATGGTATGATGCTACCAAACTGACAACAGAAGTTTTGACTCTATATAAGGCTCCGCTATATGCAGAAGGATGGGATGAAGCGCTTCACGAGATTTGTAAATTGTCATCGGAAACCATCGTCTCTGCAAAAAATGCAGACTTATTGCTACAGGCTGTAGAAGACATTCCAGTGTTGGTCATAGCCGGTGCCGAAGATTCACTCGTCTCAATGAAATATTGTCAAGCAATGGCCTCCAAATTTTTAAATTCTAGACTGGTTGCGATATCCGGATGTGGTCATCTACCCCACGAGGAGTGTCCAATGGCGTTGCTTGCGGCTATATCACCCTTTATTAATAAACTTTTCAATGTATATAACTCTGAAAGACAATAG 1944 0.448 MMVRGGQCFEKLRRFARTVFFVAALVASLLVTSLPVLVAVVDVLVPCVLISSFTCVKCYGFKEHLRRYSFKSSLMDIPLVSVVRSFIIICVYSICDGPALSHGPYLGTVTLSSFISIVLLSVKACVFSVNSQIEAEATISPTRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLMFHRVDPEAVLSCKNVFSGYQKVPRSPVPSEGRTPKSDGEMKRKPFGTARDEELPLRLLADSESLFIPCQGLTLHYKLSLPGSPPLNMSSTFCSTSSVAGGLSKLNRHLTCISPKSHRQLYRSYSNQFYGSSLHAPLLDIPVTSPHLNEEIPVLHLDEIREDEDTIKLESLSSEQNVEDIGQVGIILIHGFGGGVFSWRHVMGPLARQSNCTVAAFDRPGWGLTSRLSREDWEKKELPNPYKLESQVGLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQSSMNSFNVTVKGVVLLNVNLSREVVPSFAKILLHTSLGKKHLVRPLLRTEITHVVNRRSWYDATKLTTEVLTLYKAPLYAEGWDEALHEICKLSSETIVSAKNADLLLQAVEDIPVLVIAGAEDSLVSMKYCQAMASKFLNSRLVAISGCGHLPHEECPMALLAAISPFINKLFNVYNSERQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu4g00188 647 PANTHER HYDROLASE 153 638 - -
Vimu4g00188 647 MobiDBLite consensus disorder prediction 207 230 - -
Vimu4g00188 647 SUPERFAMILY alpha/beta-Hydrolases 368 637 IPR029058 -
Vimu4g00188 647 Pfam Alpha/beta hydrolase family 368 630 IPR000073 -
Vimu4g00188 647 PRINTS Epoxide hydrolase signature 447 460 IPR000639 GO:0003824
Vimu4g00188 647 PRINTS Epoxide hydrolase signature 372 390 IPR000639 GO:0003824
Vimu4g00188 647 PRINTS Epoxide hydrolase signature 612 634 IPR000639 GO:0003824
Vimu4g00188 647 PRINTS Epoxide hydrolase signature 579 595 IPR000639 GO:0003824
Vimu4g00188 647 Gene3D alpha/beta hydrolase 355 636 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu4g00188 Vimu-Chr4 1245188 1249528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu4g00188 2 638 Miscellaneous Gene Families AT1G80280 63.369 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu4g00188 - - gmx:100775895 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00188 4 1245188 1249528 Vimu4g00188 4 1245188 1249528 ECH
Vimu4g00188 4 1245188 1249528 Vimu11g02805 11 48146307 48146648 PCT