Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03693 ATGGAATCGAAGGAAGAAACTGCCGGCGCCGGGGAGGCGAGCCTGGATGGGCTGCCGTCGGCTCTGGTGGCGACCGTCATGACGAAGCTGGACATCGCCTCCATCTGCTCCCTCGCCTCCACCTCCTCCGTCTTCCGCTCCTGCGCCCGTCACATCCTCTCTTTCCTCCCCTCCTTCAACCTCCTCGACACTGCTCCCTCCGGCGACATGCTCAGACCCTTGTTGCCGCCCAATCCCTACCTCACCACTCTCAAGCTCGATTGTTCCCGCCTCGATGACTCCGCCATCGCCTTCCTCCTCAAACCCTCCCTCCAAGATCTCTCTCTCCACAATTGCGCCGATTTCAGTGGCAGACTCTTGTCTGAGATCGGCAACCGCTGCAAGGATCTAAGGTCTCTTTACCTTGGCTCCGTCGCCGAGAAAAGAGGGAGGGCCATTCATATTTCCGATCTAGAGGAGTTGCTCAGCGGTTGCTCCCACTTGGAAGCATTGATTCTGATGTTTGATGTCTCTCTCTTTCTACGGCACAACTTTGCTCGAGTTTGGGCTTCTGCCTCAGAGAAACTCACTTCTCTTGAGATTGGCTACATTTCTTCAGTTACCGTCACTGAACTGCTCAGCCCAAATTTGGGATCCCATCTGCCCTCAAATCCTGTTCAGCCATCTGTTCTTCCAAGCATTCAGAAACTGTGTCTTAATGTAGACTATATAACTGATGCTATGATCGGCACAATATCCAAAGGTCTAATGTTTTTGACGCATTTGGATCTTCAAGATGCACCATTGATTGAACCAAGAGTTACATTTGACCTAACCAATGCTGGTCTTCAACAAATTAATCAACTTGGGAGATTGAAACATCTTTCACTGGTTCGAAGCCAGGAGTTTCTCATTACCTACTTTCGAAGAGTGAATGATCTGGGATTGCTTCTAATGGCAGACAAGTGTGCAAACATGGAAAGCATATGCCTTGGTGGCTTTTGTCGCGTCACAGACACCGGTTTCAAAACCATCCTGCATTCTTGCACTCGCTTGTACAAGCTTAAGGTCACTCATGGGACTCATTTAACTGATCTAGTTTTTCATGATATTTCCGCAACATCCCTTACTTTGACACATGTTAGCTTAAGACGGTGCAATCTGTTAACTAACCATGCTGTTTTGAGTTTGGCATCAAACAAGGGACTCAAAATTCTTGACCTGAGGGATTGCAGAAGCCTTGGGGACGAAGCTCTCCTGGCCATTGGCACTCTGCCTAGACTGAAAATTCTACTATTAGATGGCTCTGATATAACTGATGCAGGACTTTTGTACTTAAGAGCATCTGTTATTAGTTCACTGTATGCATTGTCTCTTCGCGGCTGCAAGAGACTAACGGATAAATGTATCACAGCTCTATTTAATGGTTGTTGCGTGCTGGAATTGCGAGAACTGGATCTATCCAATCTTCCTAACTTCTCGGATAATGGAGTTCTGCTGCTTGCAAAAAGTAGGATTCCCTTTTTTGAGCTCCGTATGCGACAATGCCCTCTGGTTGGTGATACTGCAGTCATGGCATTAGCTTCAATGCTAATTGACGAGGCCAAACATGGAAGCAGTTTGCGATTGCTGGATCTTTATAACTGTGGTGGCATTACAGCGCTTGCATTTCGCTGGTTGAAGAAACCATATTTTCCAAGGCTCAAATGGTTGGGAGTGACAGGGAATGTTAACATAGACATGGTAGTAGATGCCTTAGCCAGAAGCAGACCTTTCTTACATGTGGCATCCCATGGTGAGGAGCTTGGGGCTGATCCCTACGATACTTCAGATGGGTTATACACACATGATTATGATGACGTGGATGAGTTTGAGCAGTGGCTTCTTGAAGCAGATATTGATAGTGACTTTGAAGAGATAGGCGATGCTGAAAACAATGATGAAATGGTTGCGTGA 1935 0.4713 MESKEETAGAGEASLDGLPSALVATVMTKLDIASICSLASTSSVFRSCARHILSFLPSFNLLDTAPSGDMLRPLLPPNPYLTTLKLDCSRLDDSAIAFLLKPSLQDLSLHNCADFSGRLLSEIGNRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSHLEALILMFDVSLFLRHNFARVWASASEKLTSLEIGYISSVTVTELLSPNLGSHLPSNPVQPSVLPSIQKLCLNVDYITDAMIGTISKGLMFLTHLDLQDAPLIEPRVTFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKGLKILDLRDCRSLGDEALLAIGTLPRLKILLLDGSDITDAGLLYLRASVISSLYALSLRGCKRLTDKCITALFNGCCVLELRELDLSNLPNFSDNGVLLLAKSRIPFFELRMRQCPLVGDTAVMALASMLIDEAKHGSSLRLLDLYNCGGITALAFRWLKKPYFPRLKWLGVTGNVNIDMVVDALARSRPFLHVASHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDFEEIGDAENNDEMVA 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03693 644 Gene3D Ribonuclease Inhibitor 294 424 IPR032675 -
Vimu3g03693 644 FunFam F-box/LRR-repeat protein 10 isoform A 52 468 - -
Vimu3g03693 644 SUPERFAMILY RNI-like 304 573 - -
Vimu3g03693 644 Gene3D Ribonuclease Inhibitor 425 583 IPR032675 -
Vimu3g03693 644 SMART LRR_CC_2 368 393 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 101 126 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 503 523 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 316 341 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 472 497 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 444 469 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 531 556 IPR006553 -
Vimu3g03693 644 SMART LRR_CC_2 394 418 IPR006553 -
Vimu3g03693 644 PANTHER UNCHARACTERIZED 363 551 - -
Vimu3g03693 644 SUPERFAMILY F-box domain 5 51 IPR036047 GO:0005515
Vimu3g03693 644 Gene3D Ribonuclease Inhibitor 20 217 IPR032675 -
Vimu3g03693 644 SUPERFAMILY RNI-like 51 292 - -
Vimu3g03693 644 Pfam Leucine Rich repeat 396 415 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03693 - - pvu:PHAVU_007G016400g 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03693 3 49482720 49485118 Vimu3g03693 3 49482720 49485118 ECH