Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03679 ATGGAGGGTTTAGCATGTTTGAGCCATCTTTTTGTCACCATGTTTCTAACTGGGCTTGGTGGTATCATAGCTATTCCTTCAATCACAGATGTTACCATGGCTGCACTTTGCCCTGGTCAAGATCAGTGCTCCCTTGCCATTTACCTCTCTGGTATCCAACAAGCTATGGCTGGAGTGGGATCAGTGGTGATGACACCACTCATAGGAAACTTGTCCGACAGATATGGCAGGAAAACTTTGATCACTCTTCCTCTCACTCTCTCAGTCATTCCTTATGTGATATTGGCATATAGCAGGGAGACCAAATTCTTCTATGCGTACTATGTTGTGAAAACTCTTGCTTCCATGGCAGGCGAAGGGTCCTTCCACTGCCTGGCTTTAGCATATGTGGCAGACAAGGTTCCAGATGGGAAACGAACATCCGCATTTGGGATACTTGCTGGTGTTGGATCAGCATCATTCGTTGGTGGAACATTAGCAGCTCGTTTCCTATCCACTGCCTTGACATTTCAGGTTGCTGCTGTCTTGTCAATGATTGCATTGGTGTACATGAGAATTTTCCTTAAGGATAGTGTACCTGGTGGTGGTGTGAGCCAGCCATTGTTGAAAGAGGTGGAAGAGACATGTGCTGAGGATGATTCATCACGAAAAAGGGCAACAGGAGCATTTAAGAAACTGCCCTCTCTGGGGGATTTGATTTGCTTGCTCAAGTGTAGTCCCACGTTCTCGCAAGCAGCAGTTGTTTCGTTCTTCAATAGTCTTGTGGACGGTGGCTTGATGGCTGTGTTGCTGTATTATTTAAAGGCACGCTTTCAATTCAACAAGAACCAGTTTGCAGATTTGTTGATGATTACTGGGGTTGGAGCTACTCTTGCACAACTATTTCTCATGCCCATTTTAGTGCCTGTTATAGGAGAGGAGAAACTACTCTCCACAGGGCTCTTGATTGGCTGCATAAATGTCCTTGTCTATAGCATAGCATGGTCAGCATGGGTTCCTTATGCTCTAGCAGGTTGCTCTATATTCTCAGTTTTTGTGAGGCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTACAGAACAGGGAATGGTTCAAGGATGTCTTTCAGGAATTAGTTCCTCCGCCAACATCATTGCTCCGTTAGTTTTCAGTCCACTGACAGCCTTATTCCTGTCAGAAAATGCTCCGTTTTATTATCCTGGCTTCAGTCTAATGTGCCTTGGGCTAGCGATGATGATAGCATTTTTTCAGAGTCTGATGATCCGAGCTGCTCCTCCTATTGCGGTTGGAAAAATTAGTAATAGCCGCCGCACGGATACTTTGGTCTGA 1335 0.4539 MEGLACLSHLFVTMFLTGLGGIIAIPSITDVTMAALCPGQDQCSLAIYLSGIQQAMAGVGSVVMTPLIGNLSDRYGRKTLITLPLTLSVIPYVILAYSRETKFFYAYYVVKTLASMAGEGSFHCLALAYVADKVPDGKRTSAFGILAGVGSASFVGGTLAARFLSTALTFQVAAVLSMIALVYMRIFLKDSVPGGGVSQPLLKEVEETCAEDDSSRKRATGAFKKLPSLGDLICLLKCSPTFSQAAVVSFFNSLVDGGLMAVLLYYLKARFQFNKNQFADLLMITGVGATLAQLFLMPILVPVIGEEKLLSTGLLIGCINVLVYSIAWSAWVPYALAGCSIFSVFVRPSLCSIASKQVGPTEQGMVQGCLSGISSSANIIAPLVFSPLTALFLSENAPFYYPGFSLMCLGLAMMIAFFQSLMIRAAPPIAVGKISNSRRTDTLV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03679 444 Gene3D MFS general substrate transporter like domains 7 419 IPR036259 -
Vimu3g03679 444 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 8 420 - -
Vimu3g03679 444 SUPERFAMILY MFS general substrate transporter 11 417 IPR036259 -
Vimu3g03679 444 CDD MFS_SLC46_TetA_like 10 422 - -
Vimu3g03679 444 ProSiteProfiles Major facilitator superfamily (MFS) profile. 13 428 IPR020846 GO:0022857
Vimu3g03679 444 Pfam Major Facilitator Superfamily 10 382 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03679 Vimu-Chr3 49395586 49400509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03679 2 437 Organic Solute Cotransporters AT2G16990 46.429 5.13e-126 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03679 - - gmx:100803054 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03679 3 49395586 49400509 Vimu3g03679 3 49395586 49400509 ECH