Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03670 ATGGGATGTGTTGCTTCCAAACTAGAGGAAGAAGAGGAAGTTGTGTCTATTTGTAGAGAGAGAAAACGGCTGTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCTGTGGCTCATTGTAAGTATTTTCACTCTCTCAATGCAGTAGCTGCGGCCATTAAGCTCTTTGTTGCACGCCATTCTTCACCTTCATCACCTTTCCTCATAACTTTCCCTCCTCCTTGCCCTTCTTCTCACTCTCCTTCTCCACCCTCCGAGAATGTCATCACTAACCCCATGTTCCTCCAGCAGACACCCTCAGAAACCAAGCATGAAGCCATTGCTTGTGACTCATGCATCTCTTCAACATCCTCAGACTCTTCTGAGGAAGAGACTGAAGAAAAAAGGGAAGGAGAAAGTGAACGCAAGGGAGAAGAACCGCAGCACGAACAACCATGTGGGTACTATTGCATGCCTGTGACTATGCCTATGTCCATGTCGATGTCCATGCCCGTGCCTATGCCCATGCCACCTTCAATGCCATCCCCTCAGAGAGATTTTGGATGGGACTTCTTCTACCCTTTTGACAGTTTGAGGAGTGATATGTGCGGCTACCACAGGAACTCAGACGATGATTTGAGGGCAGTGAGGGAGGAGGAAGGGATTCCTGAGTTGGAGGAAGAAGTGGAGAGAGAAGAGGTTGAGCACAAAGTGGTGACTGTTGAAGAGAATAATAATAATAATAATAAAAGTAACAGTGAAGGTGTTACGGAGCAAGCGATTAGTGGTGTTGAAACAGTGAAGGTGGTGGATGTGGCCACTGAGAATCAAGGGGAGCAAAGGGGGCTTGCAGTTCTTGATACACCTGCAGAGGGGAGAGAGCTGCTTGAAGCATTGAAAGACATCGAAGACTATTTTCTCACGGCTTATGATTCTGGAAAAGATGTGACCAGAATGCTGGAAGCTAATAGAATCCCCCTCCATTCTAGTTTGGATGAAATAAAAGATTTTCCTCCATGTGTATTCCATTATCTCTGCATGGGTTCATATGCTTCTGTTTCAAGTTTCAAGCCTTGGGATTTTGAACCATCTCATCTCACTGCAGAAAGTTCGACTAAACTCATTCAGGCAATTACATGGAAGTCCATTTCATCTAGGCAATCATCATGCAAGAGTCTCATGGCTCCAAATACGAAAAATTCCTCAACTTGGGTCGAATATAAGAATGATCTGTTTGATGATTATGGAGGAATGGATTCGGGAAGTCATTTATCAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTCTATGAGGAGGTTAAGGCTGGGGATAGCACAAGGAAAAGTTATGAAAAAAAATGTGCACAGTTGAGAAGTAAGAATGTTAGAGGAGATGATCTGCTGAGCACAGACAAAACCAAAGTTGAAGTGAAAGATCTGTATGCCGGGATCTTGGTTGCGATCCGGCGGGCAGAATCAATCTCACAGAGAATTGAGAAAATGAGAGATGAAGAACTACAACCTCAAATTGTTGAACTGTTAAAAGGCCTGACCCAGTCATGGAAAATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTGTCTGAAGTGAAGTACTTCACATGCACCACATATGAGAAATTCTGTAACCAGTCTCATGGATTTGCAACTCTTCAACTCGAAGCTCAGCTTCGAAATTGGCGTGACTGCTTCAAAGAGTACACTGCAGCACAAGAAGCATATGTTGAAGCATTACACGGATGGCTGAGTAAGTACATAGTCCCTGAAGTCGAGTTTTACTCGAGAAGCAAAAACGTCGCCTTGCCGTACGAAGTGAAAGGGCCACCTCTGCTTGTGATATGCAACGATTGGTTAGCTTCCATGCAGAAGTTACCTGATAAAATGGTAACACTGGCATTGAAAAGCGTGGTGAAAGATGTTAGAGCTTTGTGGCTTCAGCAAAACAAAGAGCAACAGCAGAAAAGGAAGGTAGATAGGTTAACAAGAGTTTTGGAGAGAAGATACTCTTCAGGAGGACTACCTAAAGTGGAGACAAAGATGCTTGAGCTGCATGCCACTGATCACGAATCAAAGTGGAGTACTACTGATGAACAAGATGAGTGCATGATGGAGAAAAATGATCATGTGGAGACACTGAGAAGAAAACTTGAAGTGGAGAAGGAGAAGCACCACAGTAGCATGCAGGAAACACAGAGGATCACGTTACATGGATTGCAATCTGGGTTTTCTCTAGTGTTTGAATCCTTGTCGGAGTTCTCCAAAGCATCACAGAAAATGTACAATGATCTTGTAAGTTATAGTGAAAAAAGTGACAAGGTTGGGAACATTACATACATAGAGGGTGGCTGCAATATTGAAAGTTGCAACAGCCAAAAATAG 2385 0.4352 MGCVASKLEEEEEVVSICRERKRLLKLAVEKRYALAVAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPPCPSSHSPSPPSENVITNPMFLQQTPSETKHEAIACDSCISSTSSDSSEEETEEKREGESERKGEEPQHEQPCGYYCMPVTMPMSMSMSMPVPMPMPPSMPSPQRDFGWDFFYPFDSLRSDMCGYHRNSDDDLRAVREEEGIPELEEEVEREEVEHKVVTVEENNNNNNKSNSEGVTEQAISGVETVKVVDVATENQGEQRGLAVLDTPAEGRELLEALKDIEDYFLTAYDSGKDVTRMLEANRIPLHSSLDEIKDFPPCVFHYLCMGSYASVSSFKPWDFEPSHLTAESSTKLIQAITWKSISSRQSSCKSLMAPNTKNSSTWVEYKNDLFDDYGGMDSGSHLSTLGRLYAWEKKLYEEVKAGDSTRKSYEKKCAQLRSKNVRGDDLLSTDKTKVEVKDLYAGILVAIRRAESISQRIEKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCTTYEKFCNQSHGFATLQLEAQLRNWRDCFKEYTAAQEAYVEALHGWLSKYIVPEVEFYSRSKNVALPYEVKGPPLLVICNDWLASMQKLPDKMVTLALKSVVKDVRALWLQQNKEQQQKRKVDRLTRVLERRYSSGGLPKVETKMLELHATDHESKWSTTDEQDECMMEKNDHVETLRRKLEVEKEKHHSSMQETQRITLHGLQSGFSLVFESLSEFSKASQKMYNDLVSYSEKSDKVGNITYIEGGCNIESCNSQK 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03670 794 PANTHER UNCHARACTERIZED 1 769 - -
Vimu3g03670 794 MobiDBLite consensus disorder prediction 112 146 - -
Vimu3g03670 794 Coils Coil 704 724 - -
Vimu3g03670 794 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Vimu3g03670 794 Pfam Protein of unknown function (DUF632) 288 643 IPR006867 -
Vimu3g03670 794 Coils Coil 208 235 - -
Vimu3g03670 794 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03670 Vimu-Chr3 49330207 49334705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03670 1 658 Acyl Lipid Metabolism Gene Families AT2G27090 28.713 2.85e-61 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03670 - - gmx:100807897 1137.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03670 3 49330207 49334705 Vimu3g03670 3 49330207 49334705 ECH