Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03668 ATGGCTTTTTGGCACCGAATCGGAAAGGCGAAGCTCAGAACCCTCTGCACCCAATTCCAACGATCTTACATTCATCTTCAGCATGCTTCTGCTCCCAAACCCTGCCATATGGACATTCCACGGCGGAATTCCGTGTTTCATGCCAGACCCCCAAGCGTTTTCAATACCGTGAGGTTCTTCGCTGCCCCTATTCAGGTAAAGCCCAGGAACGAGGAGGATGATCCTAGTGAGCAACGGTTGAATGAGAAAATCAAAGCTCCATATGTCAGGCTTGTTGTGGGTGATGACCATTCAATAGTACCAAGGTTTGAAGCATTGCAACGTGCCAAGGCGCTTAAACTTGATTTAGTTGAGGTTGATAAAAGTGCTAAGCCTCCTGTCTGTAAAATTATGAACTTCAACCAAGAAAAGTATAAGCGACATGTATGGGAAAAGGAGCGTGCTAAAAGCAGGGCTGACAAGACACTAAGAAAGGATGTTAAAGAAATGCGGTTTTCTGAAAAAATTGGAGCACAAGACCTGAAGAACAAAGCAGATATGATTAGAAAGTTAATGGAGAAGGGTTATCGAGTGAAGTGCAAGGTATCATCAAGCAAAGAAGATCAGGACTTGGCAACATTATTTTCTCCTTTGCTTGATCTGCTGGGAGATGTGTGCATTGTGGAAAGTGGACCATTTATGGCAAAAAAAGATGCATATATGATCGTCAGACATATTAAGTATGGAGTAGCGAAGAAAAGTGGGAAAAAATTTTCTAATGCAGCAAATATAGAGACTTCAACAGCCAATCCTAGTGATTCTGTTGAATATGAGAGTCATGCAGAATCTGGATTTGAAACAGAGGAGGACCCCTCTGGTGGCGACAAGCTTCTTGAAAGTTCCCGGTCTGCATTTAACAGCAATATGAACGTGACTTATTCTCATGACTATCAAACAAATGCTGCTGCAGAATCAGCCTTTCTGTCAAGAAGTAATGATCCTGTATCTCCTCCTGTTTCTGAAAACAGGTATAGGAGAACTAAACCTCAAGGTGAAAATAACGTCCAATCTAATGCACAAGTTCCTCCTGCTGAGACTGAGAATAGGTACAAAAGAGTAGAGCCAAGAAACAAATTCCAGCAAACATCAAATAACATGAACAACTACCAAGGTCCAGGAACAAGAGATGCATTCATGCCGCCCCCGCCGAATCGGAATTGGCCAAGGCAAGCTCAGGGGAATGTTAATGTTGATACCAGAATAGAAAATAATAGGCAAGCTTTCACTCCTCCTGGTTATGGAAATTTTAGAGGTCCAAATGGGGGTATCCCCAAGCATGCTGGTGCTCCCAATAGCCCAAGACCCAGTTATGGCAATTTCAGTGCTTCAAATGATGGCCTCCCCAAGCATCCCAATGCTCCTGATACTCCAAAGACCTTCTAG 1422 0.4332 MAFWHRIGKAKLRTLCTQFQRSYIHLQHASAPKPCHMDIPRRNSVFHARPPSVFNTVRFFAAPIQVKPRNEEDDPSEQRLNEKIKAPYVRLVVGDDHSIVPRFEALQRAKALKLDLVEVDKSAKPPVCKIMNFNQEKYKRHVWEKERAKSRADKTLRKDVKEMRFSEKIGAQDLKNKADMIRKLMEKGYRVKCKVSSSKEDQDLATLFSPLLDLLGDVCIVESGPFMAKKDAYMIVRHIKYGVAKKSGKKFSNAANIETSTANPSDSVEYESHAESGFETEEDPSGGDKLLESSRSAFNSNMNVTYSHDYQTNAAAESAFLSRSNDPVSPPVSENRYRRTKPQGENNVQSNAQVPPAETENRYKRVEPRNKFQQTSNNMNNYQGPGTRDAFMPPPPNRNWPRQAQGNVNVDTRIENNRQAFTPPGYGNFRGPNGGIPKHAGAPNSPRPSYGNFSASNDGLPKHPNAPDTPKTF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03668 473 NCBIfam translation initiation factor IF-3 77 236 IPR001288 GO:0003743|GO:0006413
Vimu3g03668 473 Gene3D - 72 147 IPR036787 GO:0003743|GO:0006413
Vimu3g03668 473 MobiDBLite consensus disorder prediction 319 360 - -
Vimu3g03668 473 PANTHER TRANSLATION INITIATION FACTOR IF-3 6 268 IPR001288 GO:0003743|GO:0006413
Vimu3g03668 473 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 159 240 IPR036788 GO:0006413
Vimu3g03668 473 MobiDBLite consensus disorder prediction 421 473 - -
Vimu3g03668 473 Pfam Translation initiation factor IF-3, N-terminal domain 80 146 IPR019814 GO:0003743|GO:0006413
Vimu3g03668 473 Gene3D - 156 245 IPR036788 GO:0006413
Vimu3g03668 473 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 78 148 IPR036787 GO:0003743|GO:0006413
Vimu3g03668 473 MobiDBLite consensus disorder prediction 272 289 - -
Vimu3g03668 473 MobiDBLite consensus disorder prediction 258 291 - -
Vimu3g03668 473 MobiDBLite consensus disorder prediction 342 357 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03668 K02520 - vun:114192546 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03668 3 49298262 49303568 Vimu3g03668 3 49298262 49303568 ECH