Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03666 ATGGAAAGAGAAATTGTGGAAGATATTGTGATTGTGGGGGCTGGAATTGCTGGCCTCACAACATCCTTAGGACTTCACAGGTTGGGTATCCCAAGTTTGGTGTTGGAATCCTCGGATAGTTTGAGAGTCACTGGCTTTGCTTTGTCCATATGGCAAAATGCTTGGAAGGCTTTGGATGCTGTCGGTGTTGGAGACGTCCTCCGCCGCCAACATTCTCAGCTCAATGGGATTGTCGCCACTTCATTGGTTACAGGTCAACAAACAGCAGTCATACCTTTCAGAGCAACAGGAAATCGGAAAGATATTGAAATTCGTTGTGTTAAAAGGAAGTCGTTGTTGGAAGCTCTTGTCAATGAGCTTCCAACAGGCTCCATCAGATATTCGTCAAAAGTTGTTGGTATTGAGGAATCTGGCTTCTATAAGATACTCCATCTTGCTGATGGGAAAACCATCAAAACCAAGGTGTTGATTGGGTGTGATGGAGTGAACTCCATGGTGGCAAAGTGGCTAGGCTTCAAGAAGGCCTCTTTTACTGGGAGATATGGAATCAGAGGTTGTGCAGAGGTCAACAGCAGTCACGGGTTAGAGCCCAAGTTCATGCAGTATTTTGGAAAAGGTTTTAGAGCTGGTGTTATTCCTTGTAATGAGAAGACCGTTTACTGGTTTTTCACTTGGAAACCAACCAGCCAAGTAGAGAAAGAGCTAAAAGAGAACCCTGCCAAAATGAAAGAGTATGTGTTGAAGAAGCTTGAAAATATGGCAAGTGATGTTAGATACTACATAGAAAAAACTGAAGAGGATGCCTTCCTATTAGCTCCATTGAGATATAGGAATCCCTGGGAGGTGATGATGGGGAATATTAGCAGAGGCAATGTTTGTGTTGGTGGAGATGCTTTCCACCCAATGACTCCAGACCTTGGTCAAGGAGGGTGTTGTGCATTGGAAGATGGGGTTGTTTTAGCAAGGTGTCTGGCTGAGGCATTCTCCAAAGAGAATGAAGAAGAAGAGGAGCAACAGAAAAGGATTGAAGAAAGCTTGAAGAAATATGCAAAGGAGAGAAGATGGAGAAGCATTGATGTCATTGCTACAGCTTATGTGGTGGGTTCTATTCAGCAAGCTGAGTCCAATGTGGTTAGCTTTTTAAGGGACAAGATTTTGGCTCCATTTTTAGCCATCCAATTGTTCAAAAAGTCAGGTTATGATTGTGGGAAACTAAATGATTCTTAG 1227 0.4328 MEREIVEDIVIVGAGIAGLTTSLGLHRLGIPSLVLESSDSLRVTGFALSIWQNAWKALDAVGVGDVLRRQHSQLNGIVATSLVTGQQTAVIPFRATGNRKDIEIRCVKRKSLLEALVNELPTGSIRYSSKVVGIEESGFYKILHLADGKTIKTKVLIGCDGVNSMVAKWLGFKKASFTGRYGIRGCAEVNSSHGLEPKFMQYFGKGFRAGVIPCNEKTVYWFFTWKPTSQVEKELKENPAKMKEYVLKKLENMASDVRYYIEKTEEDAFLLAPLRYRNPWEVMMGNISRGNVCVGGDAFHPMTPDLGQGGCCALEDGVVLARCLAEAFSKENEEEEEQQKRIEESLKKYAKERRWRSIDVIATAYVVGSIQQAESNVVSFLRDKILAPFLAIQLFKKSGYDCGKLNDS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03666 408 Gene3D - 8 387 IPR036188 -
Vimu3g03666 408 Pfam FAD binding domain 8 333 IPR002938 GO:0071949
Vimu3g03666 408 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 406 IPR044560 -
Vimu3g03666 408 SUPERFAMILY FAD/NAD(P)-binding domain 8 392 IPR036188 -
Vimu3g03666 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vimu3g03666 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 - -
Vimu3g03666 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 320 - -
Vimu3g03666 408 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 289 304 - -
Vimu3g03666 408 Coils Coil 325 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03666 Vimu-Chr3 49284798 49286590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03666 1 406 Miscellaneous Gene Families AT5G05320 49.878 2.27e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03666 - - gmx:100789314 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03666 3 49284798 49286590 Vimu3g03666 3 49284798 49286590 ECH