Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03665 ATGGAATCATCAGTAGTTGAAAACATTGTGATTGTGGGAGCTGGAATTGCTGGTCTTGCAACATCCTTGGCACTTCACAGGTTGGGTGTGAGAAGTTTGGTGTTAGAATATTCGGATAGTTTAAGGGTGACTGGGTTTGCTTTAACAACATGGACGAATGCTTGGAAAGCCTTGGATGCTCTTGGCGTCGGAGACATTCTTCGTCACCAACATCTCCAACTACAACATGGAGACGGTGAAGTTCGATGTGTTCGAAGACAATTAATGATAGAAGCACTTGGTAAGGAACTTCCCAGTGGGACAATCAGGTTCTCGTCAAAGGTTGTTGCAATTCAAGAATCTGGCCTCTTCAAGATACTGCATCTTGCCGATGGAACAACCATAAAAACCAAGGTATTGATTGGGTGTGATGGAATAAACTCTGTGGTGGCGAAGTGGTTGGGCTTCAAGGAGGCATCTTTTACAGGGAGATACGTGATCAGGGGTGACATAAAGTTGACGAACAACCATGGCCTTCAGCCAAATTTCATGCACTTCTTTGGAAAAGGCTTTCGATCGGGTGTTCTGCCTTGTGATGAAACAACTGTGTATTGGTTTTTTACTTGGACTCCCACCACTGAAGAGAAGGAGCTGGTGAACAATCCAGGCAAAATGAAGCGATTGGTGTTGGAGAAGTGTGAGAAGATGCCGAGTCATATGAGATGCTTTATAGAGAAAACAGAAGCAGAAGATATCTTAACATCTCCATTGAGATATAGAAACCTGTGGGAGCTTGTGTCAGGAAATATCAGCAAAGGCAATGTTTGTGTTGTTGGAGATGCTTATCACCCGATGGCGCCTGACCTTGGTCAAGGTGGATGTTGTTCCTTGGAAGATGGGATTGTCTTAGGCAGGTACTTAGCTCAGGCATTCTGCAAAAAGAGTGAGACTGAGGAGCAATACAAGAAAATTGAAGCTTGCTTGAGGAAATATGCAGAAGAGAGAAGATGGAGAAACATTGATATCAGTGTTACATCTTATGTTCTGGGGCTTCTTCTGCAAGGTGATTTGAAATTTCTGGCACATGTGAGAGACAAAGTTTTGCCTCATTTCCTAGCTGGGTTGCTGTTGAAG 1113 0.4376 MESSVVENIVIVGAGIAGLATSLALHRLGVRSLVLEYSDSLRVTGFALTTWTNAWKALDALGVGDILRHQHLQLQHGDGEVRCVRRQLMIEALGKELPSGTIRFSSKVVAIQESGLFKILHLADGTTIKTKVLIGCDGINSVVAKWLGFKEASFTGRYVIRGDIKLTNNHGLQPNFMHFFGKGFRSGVLPCDETTVYWFFTWTPTTEEKELVNNPGKMKRLVLEKCEKMPSHMRCFIEKTEAEDILTSPLRYRNLWELVSGNISKGNVCVVGDAYHPMAPDLGQGGCCSLEDGIVLGRYLAQAFCKKSETEEQYKKIEACLRKYAEERRWRNIDISVTSYVLGLLLQGDLKFLAHVRDKVLPHFLAGLLLK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03665 371 Coils Coil 307 327 - -
Vimu3g03665 371 SUPERFAMILY FAD/NAD(P)-binding domain 8 366 IPR036188 -
Vimu3g03665 371 Pfam FAD binding domain 9 71 IPR002938 GO:0071949
Vimu3g03665 371 Pfam FAD binding domain 125 304 IPR002938 GO:0071949
Vimu3g03665 371 Gene3D - 8 358 IPR036188 -
Vimu3g03665 371 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 370 IPR044560 -
Vimu3g03665 371 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 296 - -
Vimu3g03665 371 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Vimu3g03665 371 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03665 Vimu-Chr3 49253659 49255619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03665 1 371 Miscellaneous Gene Families AT5G05320 47.859 6.69e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03665 - - gmx:100808968 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03665 3 49253659 49255619 Vimu3g03665 3 49253659 49255619 ECH