Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03501 TTAAAGAAGCAGGAACTTGCCTCATTTGCTGAATCAGCAAAACAATTGTTAAAAGATGTTGAAGAGTCTTCTAAATTCGAAGTTAATGATTCGTTGCAGTCTCCTGTGGATGGTGTAGATGAGAAAAGTCTACAGCATTCTGAAAGACCAAAAATCGTCATTTCTGTTCAAGACAAAGACGGAACGAAGCAGATTCGAATGTTCATGGATGACAAGTTTGAAAGGATTGTCAAGACATATGCTGATAAAATCAAGTGTGACCAGAAACAGATAGTATTGTCCTTTGATGGTGATAAAATAAGTTCGTCCGAAACCCCTGCTAGCCTTGGGATGGAAGACGATGATATTATTGAAGTTCACGTGAAATCATGTTGA 375 0.3787 LKKQELASFAESAKQLLKDVEESSKFEVNDSLQSPVDGVDEKSLQHSERPKIVISVQDKDGTKQIRMFMDDKFERIVKTYADKIKCDQKQIVLSFDGDKISSSETPASLGMEDDDIIEVHVKSC 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03501 124 CDD Ubl_SUMO_like 51 120 - -
Vimu3g03501 124 Pfam Ubiquitin-2 like Rad60 SUMO-like 52 120 IPR022617 -
Vimu3g03501 124 SUPERFAMILY Ubiquitin-like 49 122 IPR029071 -
Vimu3g03501 124 Gene3D - 21 123 - -
Vimu3g03501 124 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 1 123 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03501 - - gmx:100500271 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03501 3 47886363 47888665 Vimu3g03501 3 47886363 47888665 ECH