Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03430 ATGAACTCTCTATCACTCTTTGCCTTCCTCTGCGTAATTTCGGCGCACTCCATCACCATCTCTGCGAACTCCGCCGCGTATCCTCCCATCCCCGGCGTGAACGCCAAAGAAGGGTGCCCCCTGCGAGGCGGGGGTGGCGACGCTTTGACTCCTCTGCGGCGAGAAGTGTACGACAATGGGAAAATCTTCGACATCAGCCACAGGTACGCGCCTGAGTTGCCGGTTTGGGAATCGTCGGAGGGGCTCGGGCAAGACTTTCTGTGGCTTACAACTAGCATTAAGAATGGGTCGCGCGCTAACAACTCCGAATTCAAGCTCGGTGCTCACACCGGCACTCATGTCGACGCGCCCGGTCACTTTTACGACAATTACTATGACGCCGGCTTTGATGTTGACTCGCTCGACCTAAAACTTCTCAACGGTCTTGCACTTTTGGTTGATACTCCACGGGATAAAAACATAACGGCTGAGGTTATGAAGTCCTTGAATATTCCTAAAGGTGTGCGTCGTGTGCTTTTCAGAACTTCAAATACCGACAGGCGACTCATGTTTAAGAAAGAATTTGATACAAGCTATGTGGGATTCAAGGAGGATGGTGCAAAATGGCTAATACAGAACACTGACATCAAACTTGTAGGAATTGATTACTTATCTGTTGCTGCTTATGATCACTCGGTTCAATCTCATCTTGCTTTTCTGGAAAGCAGGGAGATCATTCTCGTGGAAGGCCTGAAACTTGATGATGTCCCAGCAGGAGTATATTCACTCAGTTGCTTGCCTCTTAGATTGGTTCACTCTGAGGCATCACCAATACGATGCATTCTGATCACATAA 834 0.4892 MNSLSLFAFLCVISAHSITISANSAAYPPIPGVNAKEGCPLRGGGGDALTPLRREVYDNGKIFDISHRYAPELPVWESSEGLGQDFLWLTTSIKNGSRANNSEFKLGAHTGTHVDAPGHFYDNYYDAGFDVDSLDLKLLNGLALLVDTPRDKNITAEVMKSLNIPKGVRRVLFRTSNTDRRLMFKKEFDTSYVGFKEDGAKWLIQNTDIKLVGIDYLSVAAYDHSVQSHLAFLESREIILVEGLKLDDVPAGVYSLSCLPLRLVHSEASPIRCILIT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03430 277 Gene3D Putative cyclase 56 276 IPR037175 GO:0004061|GO:0019441
Vimu3g03430 277 PANTHER CYCLASE-LIKE PROTEIN 2 10 276 IPR007325 GO:0004061|GO:0019441
Vimu3g03430 277 FunFam Kynurenine formamidase 57 276 - -
Vimu3g03430 277 Pfam Putative cyclase 63 219 IPR007325 GO:0004061|GO:0019441
Vimu3g03430 277 SUPERFAMILY Putative cyclase 60 276 IPR037175 GO:0004061|GO:0019441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03430 Vimu-Chr3 47365825 47370330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03430 - - gmx:100800277 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03430 3 47365825 47370330 Vimu3g03430 3 47365825 47370330 ECH