Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03426 ATGGGCAAGAAAAAGTCTGATTCAAAGTCCGATGACAGTTACGAGAAGAAGCTCCAATTTTATTCCATCTCAACCCTTTCTGATGGAATCCCATTTGTTATTGCAGAGGTGAAAGATGCTGTTGCCTCCTTGAGTGCCCAAAAGTCTATTTCGAAGAAAAAGAGCAAACAACAAAGACGGCAAAATAAATTGAAAGCATATAATCTATCTTCACTTTTAGAGTCCCTTCCTGAGGTGAGGGCATCAAAGAAACCAGGTCGTGAGAATGACTCCAAACTTAATTGTAAATCAAGGCAGACGTTGGTGTTGAGGGAAAGAGATCGAGTTTCTGCTGTTCTTAAGGATCCTAGCTTTCAAGCAGATCCCCTGTCCGCCATTCAGCATTACTTACAGAAGACACAACCAGTTGTAGAGGAACAGCCTAAGAAAAAAGTGAACAAAAATGGATCCAAGAAGAAGAAGAAATCAAAGGCTTCAACTGGACTACAATCTATGGAAATTTAG 504 0.4028 MGKKKSDSKSDDSYEKKLQFYSISTLSDGIPFVIAEVKDAVASLSAQKSISKKKSKQQRRQNKLKAYNLSSLLESLPEVRASKKPGRENDSKLNCKSRQTLVLRERDRVSAVLKDPSFQADPLSAIQHYLQKTQPVVEEQPKKKVNKNGSKKKKKSKASTGLQSMEI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03426 167 MobiDBLite consensus disorder prediction 134 167 - -
Vimu3g03426 167 MobiDBLite consensus disorder prediction 80 98 - -
Vimu3g03426 167 Pfam Ribosome biogenesis protein SLX9 46 133 IPR028160 GO:0000462|GO:0005730|GO:0030686|GO:0030688
Vimu3g03426 167 MobiDBLite consensus disorder prediction 78 98 - -
Vimu3g03426 167 MobiDBLite consensus disorder prediction 46 66 - -
Vimu3g03426 167 PANTHER PROTEIN FAM207A 4 150 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03426 - - gmx:100527125 176.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03426 3 47346636 47348912 Vimu3g03426 3 47346636 47348912 ECH