Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03396 ATGGCGTTAACCATGAATAAGCCATGCAGAAGCAGAAGGGAAACAGATGAAGAAAACACGCTAGTGAAAGAGGAGTGTTCTTACAGTATATTGGGAGCAAACGTAACCGGGTGGAAGAATGAGCAAGTCACAGAAACTGTGTTGCTGTTTTTGGTGGTGAAAGCTCTGAACAGTGTTGAGCAACACACCTTCTGCGCAGCAACCACAATCGCACCGCACAACAGCCGCACAAACAGAGAGGAATTGGAAAGTGAGAGTTGCAAAGCGTTTGGAGGAGGAGGTTTCAAAGCTTTGGTGGGAATAGTAAGACGCACTTCAAGGATTCCATCAATTTGGGACTTGAGAGAGTACCTTTGCTCTACTCCCTCCTCGCCACCATCGGCGGCCACCATGGTTTTCTCCGAGTTCCGACCGCTCGACGAGAAGACTCTCGTCGAATACATAAAGTCCGTTCCTGCTCTCTCCTCCAAACTCGGCAACAGTTTTGATGACTTGTCAGTTAAAGAAGTCGGAGATGGCAATCTTAACTTCGTGTACATTGTTTCCAACTCCGCAGGTTCTTTTGTCATCAAACAGGTAACAGACACGTTCACGATCCGAAACCCAAAGGCCTTATGCTCGAAGAAATCATGGGCAATGGCCAATTTCGTTTCTTTTTCGTCTCACTGTTTCAAAGCTCAGACTTCTGCTCTGCCGTACGTTCGTTGCATTGGGGAATCGTGGCCTATGACAAAGGAGAGGGCTTATTTTGAGACGCTGGCACTGAAAGAAGAGGGTCGTTTGAGCCCTGAGCATGTCCCCGAAGTATATCACTTTGATCGTACCATGTCTTTGATCGCCATGCGTTACTTGGAGCCCCCGCATATAATCCTCAGAAAAGGGTTGATTGCAGGAATTGAGTACCCTCTTTTAGCTGAGCATATGGCTGATTTCATGGCAAGGACACTCTTCTTCACGTCTCTGCTTTTCCGTTCTACTACTGAGCACAAACGAGACGTTGCCGAATTTTGTGGCAATGTGGAGCTATGCAGGCTTACTGAGCAGGTCGTTTTCTCTGACCCTTATAAAATTTCCGAATATAATCGTTGGACTACGCCCTATCTTGACCGTGATGCTGAGGCTGTCCGGGAAGACAACCTGCTGAAGCTTGAAGTTGCTGAGCTGAAATCTCTGTTCATCGAGAGGGGCCAGGCACTATTACATGGTGATCTACACACTGGTTCTGTGATGGTTACTCCTGAATCAACTCAAGTTATTGATCCAGAATTTGCATTTTATGGACCAATGGGTTTTGATATTGGAGCATTCTTGGGAAACTTGATTTTGGCCTTTTTTTCTCAAGACGGACATGCTGATGAAACAAATGATCGAAAGGCCTATAAGGAGTGGATTCTGAAGACAATCGAAGACACATGGAACCTTTTCCATCACAAATTCACTTCACTATGGGATGAGCACAGAAATGGTGCTGGTGAAGCGTATCTTCCAGCAATCTATAGCAATCCCGAGGTTCAACTCCTTGTACAGAAGAAATACATGACAAATTTGTTTCACGATAGTCTTGGATTTGGTGCTGCTAAAATGATACGGAGAATTGTTGGTGTGGCGCATGTTCAGGATTTTGAATCCATTGCCGATGCTGCCAAACGGGCAACTTGTGAACGACGAGCTCTTGACTTAGCTAAGATGCTTCTAAAAGAAAGAAGAAAATTTGAAGGTATTGCTGAAATTATTTCAGCAATTCGGCAATACTAA 1755 0.4519 MALTMNKPCRSRRETDEENTLVKEECSYSILGANVTGWKNEQVTETVLLFLVVKALNSVEQHTFCAATTIAPHNSRTNREELESESCKAFGGGGFKALVGIVRRTSRIPSIWDLREYLCSTPSSPPSAATMVFSEFRPLDEKTLVEYIKSVPALSSKLGNSFDDLSVKEVGDGNLNFVYIVSNSAGSFVIKQVTDTFTIRNPKALCSKKSWAMANFVSFSSHCFKAQTSALPYVRCIGESWPMTKERAYFETLALKEEGRLSPEHVPEVYHFDRTMSLIAMRYLEPPHIILRKGLIAGIEYPLLAEHMADFMARTLFFTSLLFRSTTEHKRDVAEFCGNVELCRLTEQVVFSDPYKISEYNRWTTPYLDRDAEAVREDNLLKLEVAELKSLFIERGQALLHGDLHTGSVMVTPESTQVIDPEFAFYGPMGFDIGAFLGNLILAFFSQDGHADETNDRKAYKEWILKTIEDTWNLFHHKFTSLWDEHRNGAGEAYLPAIYSNPEVQLLVQKKYMTNLFHDSLGFGAAKMIRRIVGVAHVQDFESIADAAKRATCERRALDLAKMLLKERRKFEGIAEIISAIRQY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03396 584 Pfam Phosphotransferase enzyme family 167 437 IPR002575 -
Vimu3g03396 584 SUPERFAMILY Protein kinase-like (PK-like) 135 583 IPR011009 -
Vimu3g03396 584 Gene3D Phosphorylase Kinase; domain 1 218 287 - -
Vimu3g03396 584 Gene3D Phosphorylase Kinase; domain 1 131 215 - -
Vimu3g03396 584 Gene3D - 288 584 - -
Vimu3g03396 584 PANTHER METHYLTHIORIBOSE KINASE 131 583 - -
Vimu3g03396 584 NCBIfam S-methyl-5-thioribose kinase 230 581 IPR009212 GO:0009086|GO:0046522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03396 Vimu-Chr3 47166090 47175251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03396 K00899 - gmx:100818359 757.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03396 3 47166090 47175251 Vimu3g03396 3 47166090 47175251 ECH