Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03386 ATGATGGATTTGGAAGTCGACGAGAACGACTTGAAAGCCGCCGGCGCCGAGCTCTTCGCTGACGATGGCCGGCGAGGCATTCGCATCAGTGGTTGGTCGATCGAGACTCGGAGGCACTCCATACTGAACTCTTCCACCATCCAGGAGTGGGAACAGAAACTCAACACGTCCCATTTACCAGAAATGGTTTTCGGGGAGAACACTTTAATTCTGAGACACTTGAGCAGTGGCACCAGAATTCACTTTAATGCATTTGATGCTCTTTGTGGCTGGAAACAGGAAGCCTTGCCGCCAGTTGAAGTTCCTGCAGCTGCTAAGTGGAAATTTAGAAGCAAGCCCTCTCAGCAAGTAATACTAGATTACGACTACACCTTTACAACACCTTATTGTGGAAGTGGCAATATTGAGATTGATAAAGATGTGAGTGAGGGAGAGATTTCGAAGGAAACCAGTGATATCCTTTGGGAAGACTGCAAGGATCAAATTGATGTAGCAGCACTGGCATCCAAAGAGCCCATACTTTTCTATGATGAGGTGGTGTTATACGAGGATGAACTTGCTGATAATGGAGTATCACTTCTTACTGTAAAAGTGAGAGTAATGCCAAGCTCTTGGTTTCTTCTGTTGCGATTCTGGCTTAGAGTTGATGGAGTGCTGATTAGATTGAGAGAAACACGTATGCATTGTGTGTTTGGTGGAAATACAAGTCCCATTGTACTTCGAGAGAGTTGCTGGAGAGAATCTACATTTCAAGCTTTGTCTGCAGTAAGCTTCTGTTATGCACTTGTGCTTCGTTATTTACATTAA 807 0.4473 MMDLEVDENDLKAAGAELFADDGRRGIRISGWSIETRRHSILNSSTIQEWEQKLNTSHLPEMVFGENTLILRHLSSGTRIHFNAFDALCGWKQEALPPVEVPAAAKWKFRSKPSQQVILDYDYTFTTPYCGSGNIEIDKDVSEGEISKETSDILWEDCKDQIDVAALASKEPILFYDEVVLYEDELADNGVSLLTVKVRVMPSSWFLLLRFWLRVDGVLIRLRETRMHCVFGGNTSPIVLRESCWRESTFQALSAVSFCYALVLRYLH 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03386 268 Pfam TIP41-like family 62 253 IPR007303 GO:0043666
Vimu3g03386 268 PANTHER GAF/PUTATIVE CYTOSKELETAL PROTEIN 24 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03386 Vimu-Chr3 47111978 47114137 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03386 K17607 - gmx:100811660 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03386 3 47111978 47114137 Vimu3g03386 3 47111978 47114137 ECH