Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03378 ATGGAGAAGGGTAAGATCGAAGAGGTAATTGAGCAGCAAGTCCTCACGGTGGCGCGTGCCGTCGAGGACAAGATCGACGAGGAGATCGCCGCCCTCGAACGCCTCGACACCGATGACATCGAGGCTCTCCGTGAGCGCCGTCTACAGCAGATGAAGAAGATGGCGGAGAACCGCTCCCGTTGGATCTCCCTCGGCCACTCCGAATATACCGAGATTCCCTCCGAGAAAGACTTTTTCTCCGTCGTCAAGGCCAGCGAACGCGTCGTCTGCCACTTCTACCGCGAAAACTGGCCCTGTAAGGTTATGGACAAACATTTAAATTTGTTAGCTAAGCAGCATATCGAGACTCGGTTTGTGAAAATCAACGCTGAGAAAAGTCCGTTTCTGGCTGAGAAGCTCAAGATCATTGTTCTTCCAACACTTGCCCTCATAAAGAATGCCAAAGTCGATGATTATGTGGTTGGGTTTGATGAACTTGGTGGGACTGACGAGTTTAGCACAGAGGAGCTAGAAGAAAGATTGGCTAAAGCTCAAGTAATCTCTTATGAGGCTGAATCATCATTCCATCAAGCAAGGTCCAGTGCCAAAAACACAAGAAGTGTTCGGCAGAGCTCAAGAGCAGACTCCTCAGATTCTGAGTAA 642 0.4969 MEKGKIEEVIEQQVLTVARAVEDKIDEEIAALERLDTDDIEALRERRLQQMKKMAENRSRWISLGHSEYTEIPSEKDFFSVVKASERVVCHFYRENWPCKVMDKHLNLLAKQHIETRFVKINAEKSPFLAEKLKIIVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEELEERLAKAQVISYEAESSFHQARSSAKNTRSVRQSSRADSSDSE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03378 213 MobiDBLite consensus disorder prediction 186 205 - -
Vimu3g03378 213 CDD Phd_like_TxnDC9 65 175 - -
Vimu3g03378 213 Pfam Thioredoxin 74 156 IPR013766 -
Vimu3g03378 213 Gene3D Glutaredoxin 48 182 - -
Vimu3g03378 213 MobiDBLite consensus disorder prediction 186 213 - -
Vimu3g03378 213 Coils Coil 18 38 - -
Vimu3g03378 213 PANTHER THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 4 212 - -
Vimu3g03378 213 SUPERFAMILY Thioredoxin-like 5 180 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03378 Vimu-Chr3 47071411 47072738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03378 - - gmx:100814116 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03378 3 47071411 47072738 Vimu3g03378 3 47071411 47072738 ECH