Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03375 ATGGAAAATAAGCAGTCTTTCTTCTCCGCTCTCAAAGACGAGGTCGTACGCGGCCTCTCCCCCTCGCGTTCTCGCTCCAAGAGCCCCGCCCGGACCGCCTCCCCCATTTCCGGTCTCCTCCGCCGCAAGAAGCACAACCCAGACTCCTCCGTTGCGAGATCCGCCAGTCTCCGCCCGCTTGGGGAGACGCTCACGCCTCTTATCGAGGGGCCCGACCCGGACGCCTCCGAAAACGGGGATCCCAAGCGAATCGGGTCGGGTCTCGGACACTGGATGAAGGGCCAGCTGTCACGTGCCCCCTCCGTGTCTTACAAGAGGTCTGATCTGAGACTCCTTCTCGGTGTCATGGGCGCCCCACTCGCTCCCGTTCACGTGTGTTCCACCGACCCCTTGCCTCACCTCAGCATTAAAGACACTCCCATTGAGACTTCTTCTGCCCAGTACATATTGCAGCAGTACCTAGCAGCGTCTGGGGGGCTAAAGTTGCAGAGCTCTATACGAAATGCTTATGCGATGGGAAAGGTTAGAATGGTGGCTTCTGAATTTGAAACTGCGACTAAGGTAGTGAAGAACCGAAATGCATCTAGGTGTGCGGAGTCTGGCGGATTCGTGCTCTGGCAGATGAATCCGGACATGTGGTATGTAGAGCTTGTAGTTGGGGGTAGCAAGGTTCATGCTGGCTGCAATGGCAAGCTTGTCTGGAGGCACACCCCTTGGCTCGGTGCTCATACAGCCAAGGGACCCGTGAGGCCTTTGCGGCGTGCTCTTCAGGGTATTGATCCTAGAACCACTGCAAGTATGTTTGCCGATGCCAGATGCATAGGAGAGAAAAACATCAATGGTGAGGATTGCTTCATCCTGAAGCTTTGTACTGACCCTGAAACATTGAAGTCTCGGAGTGAGGGTCCTGCTGAGATCATAAGGCATGTCTTGTTCGGCTACTTCAGCCAGAAGACTGGTCTTCTTGTTCACATTGAGGACTCTCATCTGACGCGCATCCAATCTAATGGGGGGGATGCAGTTTATTGGGAGACCACAATCAATTCATTCCTCGGTGATTACAAGCCTGTGGAAGGTATAATGATTGCCCACTCTGGGCATTCTGTGGTAACCCTTTTCAGGTTTGGGGAGATGGCCATGAGCCACACTAAAACAAAAATGGAAGAGGCCTGGACGATTGAAGAGGTTGCATTCAATGTACCGGGTCTTTCAGTTGATTGCTTCATTCCCCCAGCCGATTTGCGAACAGGGTCTGTAAGCGAAGCTTGTGAACTTCCTCAAGACGAAAGAGGAAAAAACTCGTTAGCAGTACACCGAGCCAAAGTTGTTGCACTGGAGAAATCACATAATTGCAGTATTGATAACATGATCTGGAAGATGGAAATCTAA 1389 0.5241 MENKQSFFSALKDEVVRGLSPSRSRSKSPARTASPISGLLRRKKHNPDSSVARSASLRPLGETLTPLIEGPDPDASENGDPKRIGSGLGHWMKGQLSRAPSVSYKRSDLRLLLGVMGAPLAPVHVCSTDPLPHLSIKDTPIETSSAQYILQQYLAASGGLKLQSSIRNAYAMGKVRMVASEFETATKVVKNRNASRCAESGGFVLWQMNPDMWYVELVVGGSKVHAGCNGKLVWRHTPWLGAHTAKGPVRPLRRALQGIDPRTTASMFADARCIGEKNINGEDCFILKLCTDPETLKSRSEGPAEIIRHVLFGYFSQKTGLLVHIEDSHLTRIQSNGGDAVYWETTINSFLGDYKPVEGIMIAHSGHSVVTLFRFGEMAMSHTKTKMEEAWTIEEVAFNVPGLSVDCFIPPADLRTGSVSEACELPQDERGKNSLAVHRAKVVALEKSHNCSIDNMIWKMEI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03375 462 PANTHER LIPASE 62 415 IPR006873 -
Vimu3g03375 462 MobiDBLite consensus disorder prediction 1 88 - -
Vimu3g03375 462 Pfam Protein of unknown function (DUF620) 170 411 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03375 Vimu-Chr3 47046786 47048910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03375 - - gmx:100813032 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03375 3 47046786 47048910 Vimu3g03375 3 47046786 47048910 ECH