Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g03366 ATGGCCATGTCCACAAGTTCAGACAGCTTAGTTCATAGTGCTCCATTCTGTCCTGCAGTCAATACTGTTTCTGTTTCCTTCTCAAGTAACCATAAACCATGGAATGCTCTGCATGCTTTGAGAAGCAGGCTTTCTGATCCCAACAATGTGTTGCAGAGTTGGGACCCAACACTGGTTAATCCCTGTACTTGGTTCCATGTTACCTGTGACTCCAACAATCATGTGATTCGCTTAGACTTGGGCAACTCTAACGTTTCTGGGACTCTGGGCCCAGAACTTGGCCAGCTACAGCATCTTCAGTACCTGTATGGTCTTCTTCCTTTGCCTGTTATAGCTCAGAAGTTCAGAAACTAG 354 0.4576 MAMSTSSDSLVHSAPFCPAVNTVSVSFSSNHKPWNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNVSGTLGPELGQLQHLQYLYGLLPLPVIAQKFRN 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g03366 117 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 25 103 - -
Vimu3g03366 117 Pfam Leucine rich repeat N-terminal domain 36 70 IPR013210 -
Vimu3g03366 117 Gene3D Ribonuclease Inhibitor 32 104 IPR032675 -
Vimu3g03366 117 SUPERFAMILY L domain-like 34 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g03366 Vimu-Chr3 46987425 46988714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu3g03366 28 102 Receptor kinase-like Gene Family AT1G34210 68.000 2.72e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g03366 - - gmx:100816279 131.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g03366 3 46987425 46988714 Vimu3g03366 3 46987425 46988714 ECH